Evidence map›Paper›PMID 36050806›Full record

ArticleFEBS letters2022

SARS-CoV-2 spike protein aggregation is triggered by bacterial lipopolysaccharide.

Jitka Petrlova, Firdaus Samsudin, Peter J Bond, Artur Schmidtchen

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Jitka PetrlovaDivision of Dermatology and Venereology, Department of Clinical Sciences, Lund University, Sweden.ORCID 0000-0002-7554-3945
Firdaus SamsudinBioinformatics Institute (BII), Agency for Science, Technology and Research (A*STAR), Singapore City, Singapore.
Peter J BondBioinformatics Institute (BII), Agency for Science, Technology and Research (A*STAR), Singapore City, Singapore.
Artur SchmidtchenDivision of Dermatology and Venereology, Department of Clinical Sciences, Lund University, Sweden.ORCID 0000-0001-9209-3141
Agency for Science, Technology and Research · SGLund University · SEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV-2 spike (S) protein is crucial for virus invasion in COVID-19. Here, we showed that lipopolysaccharide (LPS) can trigger S protein aggregation at high doses of LPS and S protein. We demonstrated the formation of S protein aggregates by microscopy analyses, aggregation and gel shift assays. LPS at high levels boosts the formation of S protein aggregates as detected by amytracker and thioflavin T dyes that specifically bind to aggregating proteins. We validated the role of LPS by blocking the formation of aggregates by the endotoxin-scavenging thrombin-derived peptide TCP-25. Aggregation-prone sequences in S protein are predicted to be nearby LPS binding sites, while molecular simulations showed stable formation of S protein-LPS higher-order oligomers. Collectively, our results provide evidence of LPS-induced S protein aggregation.

Indexed as

COVID-19Spike Glycoprotein, CoronavirusColoring AgentsHumansLipopolysaccharidesPeptidesProtein AggregatesProtein BindingSARS-CoV-2ThrombinColoring AgentsLipopolysaccharidesPeptidesProtein AggregatesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2ThrombinCOVID-19endotoxinsinflammationlipopolysaccharideprotein-aggregationspike protein

Identifiers

PMID36050806
PMCPMC9538650
OpenAlexW4294147141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.