Evidence map›Paper›PMID 36050469›Full record

ArticleNature cell biology2022

NRF2 mediates melanoma addiction to GCDH by modulating apoptotic signalling.

Sachin Verma, David Crawford, Ali Khateb, Yongmei Feng, Eduard Sergienko, Gaurav Pathria, Chen-Ting Ma, Steven H Olson, David Scott, Rabi Murad and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

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  19. The Multifaceted Roles of NRF2 in Cancer: Friend or Foe?Antioxidants (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Sachin VermaCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
David CrawfordCancer Data Science Lab (CDSL), National Cancer Institute, National Institute of Health, Bethesda, MD, USA.
Ali KhatebCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Yongmei FengCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Eduard SergienkoConrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Gaurav PathriaCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Chen-Ting MaConrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Steven H OlsonConrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
David ScottCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Rabi MuradCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Eytan RuppinCancer Data Science Lab (CDSL), National Cancer Institute, National Institute of Health, Bethesda, MD, USA.
Michael JacksonConrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Ze'ev A RonaiCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA. zeev@ronailab.net.ORCID http://orcid.org/0000-0002-3859-0400
Sanford Burnham Prebys Medical Discovery Institute · USNational Cancer Institute · US

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Michael Jackson · 1985 to 2026
$107.2M
Rewired Signaling at the Nexus of Melanoma Metastasis and ResistanceR35CA197465 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI RONAI, ZEEV A. · 2016 to 2022
$7.9M
GCDH Addiction in MelanomaR01CA266973 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Steven H Olson, Zeev A. Ronai · 2022 to 2026
$2.7M
Discovery of Glutaryl-CoA Dehydrogenase inhibitors for melanoma and pancreatic cancerR01CA266828 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SERGIENKO, EDUARD A. · 2022 to 2025
$2.3M
NCI NIH HHS P30 CA030199NCI NIH HHS R01 CA266828NCI NIH HHS R01 CA266973NCI NIH HHS R35 CA197465
6 · The paper itself

Abstract

Tumour dependency on specific metabolic signals has been demonstrated and often guided numerous therapeutic approaches. We identify melanoma addiction to the mitochondrial protein glutaryl-CoA dehydrogenase (GCDH), which functions in lysine metabolism and controls protein glutarylation. GCDH knockdown induced cell death programmes in melanoma cells, an activity blocked by inhibition of the upstream lysine catabolism enzyme DHTKD1. The transcription factor NRF2 mediates GCDH-dependent melanoma cell death programmes. Mechanistically, GCDH knockdown induces NRF2 glutarylation, increasing its stability and DNA binding activity, with a concomitant transcriptional upregulation of ATF4, ATF3, DDIT3 and CHAC1, resulting in cell death. In vivo, inducible inactivation of GCDH effectively inhibited melanoma tumour growth. Correspondingly, reduced GCDH expression correlated with improved survival of patients with melanoma. These findings identify melanoma cell addiction to GCDH, limiting apoptotic signalling by controlling NRF2 glutarylation. Inhibiting the GCDH pathway could thus represent a therapeutic approach to treat melanoma.

Indexed as

Amino Acid Metabolism, Inborn ErrorsBrain Diseases, MetabolicMelanomaDNAGlutaryl-CoA DehydrogenaseHumansKetoglutarate Dehydrogenase ComplexLysineMitochondrial ProteinsNF-E2-Related Factor 2DHTKD1 protein, humanDNAGlutaryl-CoA DehydrogenaseKetoglutarate Dehydrogenase ComplexLysineMitochondrial ProteinsNFE2L2 protein, humanNF-E2-Related Factor 2

Identifiers

PMID36050469
PMCPMC9977532
OpenAlexW4294053497

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.