Evidence map›Paper›PMID 36050368›Full record

ArticleScientific reports2022

Analysis of a rice blast resistance gene Pita-Fuhui2663 and development of selection marker.

Niqing He, Fenghuang Huang, Mingxiang Yu, Yebao Zhu, Qingshun Q Li, Dewei Yang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Niqing He *Rice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China.
Fenghuang Huang *Rice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China.
Mingxiang Yu *Rice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China.
Yebao ZhuRice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China.
Qingshun Q LiRice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China. qqli@westernu.edu.
Dewei YangRice Research Institute, Fujian High Quality Rice Research and Development Center, Fujian Academy of Agricultural Sciences, Fuzhou, 350019, Fujian, China. dewei-y@163.com.
Fujian Academy of Agricultural Sciences · CNRice Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice blast is a detrimental rice disease caused by the fungus Magnaporthe oryzae. Here, we identified a resistance gene from the rice cultivar Fuhui 2663 which is resistant to the rice blast isolate KJ201. Through isolated population analyses and sequencing approaches, the candidate gene was traced to chromosome 12. With the use of a map-based cloning strategy, the resistance gene was ultimately mapped to an 80-kb resistance locus region containing the Pita gene. Candidate gene prediction and cDNA sequencing indicated that the target resistance gene in Fuhui 2663 was allelic to Pita, thus being referred to as Pita-Fuhui2663 hereafter. Further analysis showed that the Fuhui 2663 protein had one amino acid change: Ala (A) residue 918 in Pita-Fuhui2663 was replaced by Ser (S) in Pita-S, leading to a significant change in the 3D structure of the Pita-S protein. CRISPR/Cas9 knockout experiments confirmed that Pita-Fuhui2663 is responsible for the resistance phenotype of Fuhui 2663. Importantly, Pita-Fuhui2663 did not affect the main agronomic traits of the variety compared to the Pita gene as verified by knockout experiments, indicative of potential applications of Pita-Fuhui2663 in broader breeding programs. Furthermore, a Pita-Fuhui2663-dCAPS molecular marker with good specificity and high efficiency was developed to facilitate rice breeding for resistance to this devastating disease.

Indexed as

MagnaportheOryzaDisease ResistancePhenotypePlant BreedingPlant Diseases

Identifiers

PMID36050368
PMCPMC9437026
OpenAlexW4294100815

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.