Evidence map›Paper›PMID 36049480›Full record

ArticleCurrent biology : CB2022

A mechanism for red coloration in vertebrates.

Matthew B Toomey, Cristiana I Marques, Pedro M Araújo, Delai Huang, Siqiong Zhong, Yu Liu, Gretchen D Schreiner, Connie A Myers, Paulo Pereira, Sandra Afonso and 13 more

Open access · greenAbstract read
In one paragraph

Article in Current biology : CB, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  15. The hybrid history of zebrafish.G3 (Bethesda, Md.) · 2025
    Article
  16. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  19. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Matthew B ToomeyDepartment of Biological Science, University of Tulsa, Tulsa, OK, USA. Electronic address: mbt6332@utulsa.edu.
Cristiana I MarquesCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Pedro M AraújoCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal; University of Coimbra, MARE - Marine and Environmental Sciences Centre, Department of Life Sciences, Coimbra, Portugal.
Delai HuangDepartment of Biology and Department of Cell Biology, University of Virginia, Charlottesville, VA, USA.
Siqiong ZhongProgram in Human Nutrition, Department of Human Sciences, Ohio State University, Columbus, OH, USA.
Yu LiuDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Gretchen D SchreinerDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Connie A MyersDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Paulo PereiraCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.
Sandra AfonsoCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal.
Pedro AndradeCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal.
Małgorzata A GazdaCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal.
Ricardo J LopesCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal; MHNC-UP, Natural History and Science Museum of the University of Porto, Porto, Portugal.
Ivan ViegasUniversity of Coimbra, Centre for Functional Ecology, Department of Life Sciences, Coimbra, Portugal.
Rebecca E KochDepartment of Biological Science, University of Tulsa, Tulsa, OK, USA.
Maureen E HaynesDepartment of Biological Science, University of Tulsa, Tulsa, OK, USA.
Dustin J SmithDepartment of Biological Science, University of Tulsa, Tulsa, OK, USA.
Yohey OgawaDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Daniel MurphyDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Rachel E KopecProgram in Human Nutrition, Department of Human Sciences, Ohio State University, Columbus, OH, USA.
David M ParichyDepartment of Biology and Department of Cell Biology, University of Virginia, Charlottesville, VA, USA.
Miguel CarneiroCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Universidade do Porto, Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal. Electronic address: miguel.carneiro@cibio.up.pt.
Joseph C CorboDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA. Electronic address: jcorbo@wustl.edu.
Universidade do Porto · PTWashington University in St. Louis · USUniversity of Tulsa · USThe Ohio State University · USUniversity of Coimbra · PTUniversity of Virginia · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
Fish facility enhancementR35GM122471 · NIGMS · UNIVERSITY OF WASHINGTON · PI DAVID M PARICHY · 2017 to 2026
$6.4M
Elucidating the cis-regulatory grammar of human photoreceptorsR01EY030075 · NEI · WASHINGTON UNIVERSITY · PI CORBO, JOSEPH · 2020 to 2023
$2.2M
NCI NIH HHS P30 CA016058NEI NIH HHS R01 EY030075NIGMS NIH HHS R35 GM122471
6 · The paper itself

Abstract

Red coloration is a salient feature of the natural world. Many vertebrates produce red color by converting dietary yellow carotenoids into red ketocarotenoids via an unknown mechanism. Here, we show that two enzymes, cytochrome P450 2J19 (CYP2J19) and 3-hydroxybutyrate dehydrogenase 1-like (BDH1L), are sufficient to catalyze this conversion. In birds, both enzymes are expressed at the sites of ketocarotenoid biosynthesis (feather follicles and red cone photoreceptors), and genetic evidence implicates these enzymes in yellow/red color variation in feathers. In fish, the homologs of CYP2J19 and BDH1L are required for ketocarotenoid production, and we show that these enzymes are sufficient to produce ketocarotenoids in cell culture and when ectopically expressed in fish skin. Finally, we demonstrate that the red-cone-enriched tetratricopeptide repeat protein 39B (TTC39B) enhances ketocarotenoid production when co-expressed with CYP2J19 and BDH1L. The discovery of this mechanism of ketocarotenoid biosynthesis has major implications for understanding the evolution of color diversity in vertebrates.

Indexed as

Hydroxybutyrate DehydrogenasePigmentationAnimalsBirdsCarotenoidsCytochrome P-450 Enzyme SystemFeathersCarotenoidsCytochrome P-450 Enzyme SystemHydroxybutyrate Dehydrogenase

Identifiers

PMID36049480
PMCPMC9588406
OpenAlexW4293833838

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.