Evidence map›Paper›PMID 36046124›Full record

ArticleCancer research communications2022

Development of an automated liquid biopsy assay for methylated markers in advanced breast cancer.

Mary Jo Fackler, Suzana Tulac, Neesha Venkatesan, Adam J Aslam, Timothy N de Guzman, Claudia Mercado-Rodriguez, Leslie M Cope, Bradley M Downs, Abdul Hussain Vali, Wanjun Ding and 11 more

Open access · goldAbstract read
In one paragraph

Article in Cancer research communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Development of the cf-MMSP Assay for Enhanced Analytical Sensitivity of Methylated DNA in Breast Cancer Liquid Biopsy.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 1 institution in 2 countries.

Mary Jo FacklerDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Suzana TulacCepheid, Sunnyvale, CA.
Neesha VenkatesanCepheid, Sunnyvale, CA.
Adam J AslamCepheid, Sunnyvale, CA.
Timothy N de GuzmanCepheid, Sunnyvale, CA.
Claudia Mercado-RodriguezDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Leslie M CopeDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Bradley M DownsDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Abdul Hussain ValiDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Wanjun DingDepartment of Oncology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China PRC.
Jennifer LehmanDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Rita DenbowDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Jeffrey ReynoldsDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Morgan E BuckleyDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Kala VisvanathanDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Christopher B UmbrichtDepartment of Surgery, Johns Hopkins University School of Medicine, Baltimore MD.
Antonio C WolffDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Vered StearnsDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Michael BatesCepheid, Sunnyvale, CA.
Edwin W LaiCepheid, Sunnyvale, CA.
Saraswati SukumarDepartment of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD.
Johns Hopkins University · US

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI WILLIAM George NELSON · 1985 to 2026
$208.6M
VACCINES--A NEW PARADIGM FOR BREAST CANCERP50CA088843 · NCI · JOHNS HOPKINS UNIVERSITY · PI DAVIDSON, NANCY ELLEN · 2000 to 2010
$27.8M
Theranostic Imaging of Metastatic Prostate CancerP50CA103175 · NCI · JOHNS HOPKINS UNIVERSITY · PI AMBINDER, RICHARD FREDERICK · 2003 to 2015
$17.9M
Discovery and validation of early molecular breast cancer risk markers in benign breast diseaseR01CA222779 · NCI · JOHNS HOPKINS UNIVERSITY · PI UMBRICHT, CHRISTOPHER B · 2018 to 2023
$2.3M
NCI NIH HHS P30 CA006973NCI NIH HHS P50 CA088843NCI NIH HHS P50 CA103175NCI NIH HHS R01 CA222779
6 · The paper itself

Abstract

Current molecular liquid biopsy assays to detect recurrence or monitor response to treatment require sophisticated technology, highly trained personnel, and a turnaround time of weeks. We describe the development and technical validation of an automated Liquid Biopsy for Breast Cancer Methylation (LBx-BCM) prototype, a DNA methylation detection cartridge assay that is simple to perform and quantitatively detects nine methylated markers within 4.5 h. LBx-BCM demonstrated high interassay reproducibility when analyzing exogenous methylated DNA (75-300 DNA copies) spiked into plasma (Coefficient of Variation, CV = 7.1 - 10.9%) and serum (CV = 19.1 - 36.1%). It also demonstrated high interuser reproducibility (Spearman

Indexed as

Breast NeoplasmsDNADNA MethylationFemaleHumansLiquid BiopsyReproducibility of ResultsDNAAutomatedBiomarkerBreast CancerDNA MethylationLiquid Biopsy

Identifiers

PMID36046124
PMCPMC9426415
OpenAlexW4229028880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.