Evidence map›Paper›PMID 36044867›Full record

ArticleCell reports2022

Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma.

Haider Tari, Ketty Kessler, Nick Trahearn, Benjamin Werner, Maria Vinci, Chris Jones, Andrea Sottoriva

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 18 citations in OpenAlex.

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  12. Modeling tumors as species-rich ecological communities.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Haider TariEvolutionary Genomics and Modelling Lab, Centre for Evolution and Cancer, The Institute of Cancer Research, London, UK; Glioma Team, The Institute of Cancer Research, London, UK.
Ketty KesslerGlioma Team, The Institute of Cancer Research, London, UK.
Nick TrahearnEvolutionary Genomics and Modelling Lab, Centre for Evolution and Cancer, The Institute of Cancer Research, London, UK.
Benjamin WernerBarts Cancer Institute, Queen Mary University of London, London, UK.
Maria VinciDepartment of Haematology/Oncology, Cell and Gene Therapy, Bambino Gesù Children's Hospital-IRCCS, Rome, Italy.
Chris JonesGlioma Team, The Institute of Cancer Research, London, UK. Electronic address: chris.jones@icr.ac.uk.
Andrea SottorivaEvolutionary Genomics and Modelling Lab, Centre for Evolution and Cancer, The Institute of Cancer Research, London, UK; Research Centre for Computational Biology, Human Technopole, Milan, Italy. Electronic address: andrea.sottoriva@fht.org.
Institute of Cancer Research · GBBambino Gesù Children's Hospital · ITQueen Mary University of London · GB

Funding

The Role of the Microbiome in Cancer Suppression and Susceptibility Across SpeciesU54CA217376 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI MALEY, CARLO · 2018 to 2022
$8.6M
Cancer Research UK 13982Cancer Research UK 23536Cancer Research UK A22909Cancer Research UK A23536NCI NIH HHS U54 CA217376Wellcome TrustWellcome Trust 105104/Z/14/ZWellcome Trust 202778/B/16/Z
6 · The paper itself

Abstract

Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG.

Indexed as

Brain NeoplasmsGliomaBayes TheoremCarcinogenesisHumansPhenotypecancercomputationalcooperationCP: CancerDIPGheterogeneityinteractionsmathematicalpediatricsubclonal

Identifiers

PMID36044867
PMCPMC9449134
OpenAlexW4293574570

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.