Evidence map›Paper›PMID 36042231›Full record

ArticleNature communications2022

Single-cell transcriptome and translatome dual-omics reveals potential mechanisms of human oocyte maturation.

Wenqi Hu, Haitao Zeng, Yanan Shi, Chuanchuan Zhou, Jiana Huang, Lei Jia, Siqi Xu, Xiaoyu Feng, Yanyan Zeng, Tuanlin Xiong and 15 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed, 2 pooled it
25.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 2 syntheses or guidelines pooled it, 122 citations in OpenAlex.

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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 1 country.

Wenqi Hu *Center for Stem Cell Biology and Regenerative Medicine, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, 100084, Beijing, China.
Haitao Zeng *Reproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Yanan ShiReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Chuanchuan ZhouReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Jiana HuangReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Lei JiaReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Siqi XuCenter for Stem Cell Biology and Regenerative Medicine, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, 100084, Beijing, China.
Xiaoyu FengCenter for Stem Cell Biology and Regenerative Medicine, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, 100084, Beijing, China.
Yanyan ZengReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Tuanlin XiongMOE Key Laboratory of Bioinformatics, Beijing Advanced Innovation Center for Structural Biology and Frontier Research Center for Biological Structure, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, 100084, Beijing, China.
Wenze HuangMOE Key Laboratory of Bioinformatics, Beijing Advanced Innovation Center for Structural Biology and Frontier Research Center for Biological Structure, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, 100084, Beijing, China.
Peng SunReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Yajie ChangReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Tingting LiReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.
Cong FangReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China.ORCID 0000-0001-8835-0694
Keliang WuCenter for Reproductive Medicine, Cheeloo College of Medicine, Shandong University, 250012, Jinan, Shandong, China.
Lingbo CaiState Key Laboratory of Reproductive Medicine, Center of Clinical Reproductive Medicine, First Affiliated Hospital, Nanjing Medical University, 210029, Nanjing, China.
Wuhua NiReproductive Medicine Center, The First Affiliated Hospital of Wenzhou Medical University, 325000, Wenzhou, Zhejiang Province, China.ORCID 0000-0001-9611-8537
Yan LiReproductive Medicine Center, The First Affiliated Hospital of Wenzhou Medical University, 325000, Wenzhou, Zhejiang Province, China.
Zhiyong YangCenter for Reproductive Medicine, Shanghai Tenth People's Hospital of Tongji University, 200072, Shanghai, China.
Qiangfeng Cliff ZhangMOE Key Laboratory of Bioinformatics, Beijing Advanced Innovation Center for Structural Biology and Frontier Research Center for Biological Structure, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, 100084, Beijing, China.ORCID 0000-0002-4913-0338
RiCheng ChianCenter for Reproductive Medicine, Shanghai Tenth People's Hospital of Tongji University, 200072, Shanghai, China.
Zijiang ChenCenter for Reproductive Medicine, Cheeloo College of Medicine, Shandong University, 250012, Jinan, Shandong, China.ORCID 0000-0001-6637-6631
Xiaoyan LiangReproductive Medicine Research Center, The Sixth Affiliated Hospital of Sun Yat-sen University, 510655, Guangzhou, China. liangxy2@mail.sysu.edu.cn.ORCID 0000-0002-9701-3865
Kehkooi KeeCenter for Stem Cell Biology and Regenerative Medicine, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, 100084, Beijing, China. kkee@tsinghua.edu.cn.ORCID 0000-0001-6926-7203
Sun Yat-sen University · CNTsinghua University · CNCenter for Life Sciences · CNShandong University · CNTongji University · CNWenzhou Medical University · CNNanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The combined use of transcriptome and translatome as indicators of gene expression profiles is usually more accurate than the use of transcriptomes alone, especially in cell types governed by translational regulation, such as mammalian oocytes. Here, we developed a dual-omics methodology that includes both transcriptome and translatome sequencing (T&T-seq) of single-cell oocyte samples, and we used it to characterize the transcriptomes and translatomes during mouse and human oocyte maturation. T&T-seq analysis revealed distinct translational expression patterns between mouse and human oocytes and delineated a sequential gene expression regulation from the cytoplasm to the nucleus during human oocyte maturation. By these means, we also identified a functional role of OOSP2 inducing factor in human oocyte maturation, as human recombinant OOSP2 induced in vitro maturation of human oocytes, which was blocked by anti-OOSP2. Single-oocyte T&T-seq analyses further elucidated that OOSP2 induces specific signaling pathways, including small GTPases, through translational regulation.

Indexed as

OogenesisTranscriptomeAnimalsGene Expression ProfilingGene Expression RegulationHumansMammalsMiceOocytes

Identifiers

PMID36042231
PMCPMC9427852
OpenAlexW4293695816

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.