Evidence map›Paper›PMID 36042200›Full record

ArticleNature communications2022

Transcontinental spread and evolution of Mycobacterium tuberculosis W148 European/Russian clade toward extensively drug resistant tuberculosis.

Matthias Merker, Jean-Philippe Rasigade, Maxime Barbier, Helen Cox, Silke Feuerriegel, Thomas A Kohl, Egor Shitikov, Kadri Klaos, Cyril Gaudin, Rudy Antoine and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 66 citations in OpenAlex.

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  14. Patterns ofFrontiers in tuberculosis · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 8 countries.

Matthias Merker *Molecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Jean-Philippe Rasigade *EPHE, PSL University, Paris, France.
Maxime Barbier *EPHE, PSL University, Paris, France.
Helen CoxDivision of Medical Microbiology and Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Silke FeuerriegelMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Thomas A KohlMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.ORCID 0000-0002-1126-6803
Egor ShitikovFederal Research and Clinical Centre of Physical-Chemical Medicine, Moscow, Russian Federation.
Kadri KlaosSA TUH United Laboratories, Mycobacteriology, Tartu, Estonia.ORCID 0000-0002-0055-755X
Cyril GaudinGenoscreen, Lille, France.
Rudy AntoineUniv. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019 - UMR 9017 - CIIL - Centre d'Infection et d'Immunité de Lille, F-59000, Lille, France.
Roland DielInstitute for Epidemiology, Schleswig-Holstein University Hospital, Kiel, Germany.
Sonia BorrellSwiss Tropical and Public Health Institute, Allschwil, Switzerland.
Sebastien GagneuxSwiss Tropical and Public Health Institute, Allschwil, Switzerland.ORCID 0000-0001-7783-9048
Vladyslav NikolayevskyyImperial College London, London, UK.
Sönke AndresNational and WHO Supranational Reference Center for Mycobacteria, Research Center Borstel, Borstel, Germany.
Valeriu CruduNational TB Reference Laboratory, Institute of Phthisiopneumology, Chisinau, Moldova.ORCID 0000-0001-5059-8002
Philip SupplyUniv. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019 - UMR 9017 - CIIL - Centre d'Infection et d'Immunité de Lille, F-59000, Lille, France. philip.supply@ibl.cnrs.fr.ORCID 0000-0003-3690-3853
Stefan NiemannMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany. sniemann@fz-borstel.de.
Thierry WirthEPHE, PSL University, Paris, France. wirth@mnhn.fr.ORCID 0000-0002-7371-0172
Centre National de la Recherche Scientifique · FRGerman Center for Infection Research · DESwiss Tropical and Public Health Institute · CHFederal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin · RUImperial College London · GBPhthisiopneumology Institute "Chiril Draganiuc" · MDResearch Center Borstel - Leibniz Lung Center · DETartu University Hospital · EEUniversité Claude Bernard Lyon 1 · FRUniversity Hospital Schleswig-Holstein · DEUniversity of Cape Town · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transmission-driven multi-/extensively drug resistant (M/XDR) tuberculosis (TB) is the largest single contributor to human mortality due to antimicrobial resistance. A few major clades of the Mycobacterium tuberculosis complex belonging to lineage 2, responsible for high prevalence of MDR-TB in Eurasia, show outstanding transnational distributions. Here, we determined factors underlying the emergence and epidemic spread of the W148 clade by genome sequencing and Bayesian demogenetic analyses of 720 isolates from 23 countries. We dated a common ancestor around 1963 and identified two successive epidemic expansions in the late 1980s and late 1990s, coinciding with major socio-economic changes in the post-Soviet Era. These population expansions favored accumulation of resistance mutations to up to 11 anti-TB drugs, with MDR evolving toward additional resistances to fluoroquinolones and second-line injectable drugs within 20 years on average. Timescaled haplotypic density analysis revealed that widespread acquisition of compensatory mutations was associated with transmission success of XDR strains. Virtually all W148 strains harbored a hypervirulence-associated ppe38 gene locus, and incipient recurrent emergence of prpR mutation-mediated drug tolerance was detected. The outstanding genetic arsenal of this geographically widespread M/XDR strain clade represents a "perfect storm" that jeopardizes the successful introduction of new anti-M/XDR-TB antibiotic regimens.

Indexed as

Extensively Drug-Resistant TuberculosisMycobacterium tuberculosisTuberculosis, Multidrug-ResistantAntitubercular AgentsBayes TheoremDrug Resistance, Multiple, BacterialHumansMicrobial Sensitivity TestsAntitubercular Agents

Identifiers

PMID36042200
PMCPMC9426364
OpenAlexW4293574909

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.