Evidence map›Paper›PMID 36041880›Full record

ReviewCold Spring Harbor perspectives in medicine2022

Chromatin Variants Reveal the Genetic Determinants of Oncogenesis in Breast Cancer.

Shalini Bahl, Jason S Carroll, Mathieu Lupien

Open access · greenAbstract readReview
In one paragraph

Review in Cold Spring Harbor perspectives in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Breast Cancer.Cold Spring Harbor perspectives in medicine · 2024
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Shalini BahlPrincess Margaret Cancer Centre, Toronto, Ontario M5G 1L7, Canada.
Jason S CarrollCancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 0RE, United Kingdom.
Mathieu LupienPrincess Margaret Cancer Centre, Toronto, Ontario M5G 1L7, Canada.
Princess Margaret Cancer Centre · CAUniversity of Cambridge · GBUniversity of Toronto · CA

Funding

Cancer Research UK 20411Cancer Research UK A20411Cancer Research UK A29580Cancer Research UK A31344Cancer Research UK DRCPGM\100088
6 · The paper itself

Abstract

Breast cancer presents as multiple distinct disease entities. Each tumor harbors diverse cell populations defining a phenotypic heterogeneity that impinges on our ability to treat patients. To date, efforts mainly focused on genetic variants to find drivers of inter- and intratumor phenotypic heterogeneity. However, these efforts have failed to fully capture the genetic basis of breast cancer. Through recent technological and analytical approaches, the genetic basis of phenotypes can now be decoded by characterizing chromatin variants. These variants correspond to polymorphisms in chromatin states at DNA sequences that serve a distinct role across cell populations. Here, we review the function and causes of chromatin variants as they relate to breast cancer inter- and intratumor heterogeneity and how they can guide the development of treatment alternatives to fulfill the goal of precision cancer medicine.

Indexed as

ChromatinNeoplasmsCarcinogenesisCell Transformation, NeoplasticGenetic HeterogeneityHumansPrecision MedicineChromatin

Identifiers

PMID36041880
PMCPMC9524388
OpenAlexW4293703910

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.