Evidence map›Paper›PMID 36040163›Full record

ArticleMicrobiology spectrum2022

Capturing Structural Variants of Herpes Simplex Virus Genome in Full Length by Oxford Nanopore Sequencing.

Rajagopalan Saranathan, Emmanuel Asare, Lawrence Leung, Anna Paula de Oliveira, Katherine E Kaugars, Claire V Mulholland, Regy Lukose, Michael Berney, William R Jacobs

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Comparison ofFrontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Rajagopalan SaranathanDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Emmanuel AsareDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Lawrence LeungDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Anna Paula de OliveiraDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Katherine E KaugarsDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Claire V MulhollandDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Regy LukoseDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
Michael BerneyDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.
William R JacobsDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York City, New York, USA.ORCID 0000-0003-3321-3080
Albert Einstein College of Medicine · US

Funding

Molecular Genetic Analysis of Mycobacterium TuberculosisR37AI026170 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI WILLIAM Robert JACOBS · 2004 to 2026
$7.7M
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR01AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 2022
$7.1M
TB Phage therapy: Optimizing delivery methods of mycobacteriophages to target intracellular Mycobacterium tuberculosisR21AI156853 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI JACOBS, WILLIAM ROBERT · 2021 to 2022
$462k
NIAID NIH HHS R01 AI026170NIAID NIH HHS R21 AI156853NIAID NIH HHS R37 AI026170
6 · The paper itself

Abstract

Genome sequencing and assembly of viral genomes within the

Indexed as

Herpes SimplexNanopore SequencingHigh-Throughput Nucleotide SequencingHumansNucleotidesSequence Analysis, DNASimplexvirusNucleotidesgenome isomersherpes simplex virusOxford Nanopore sequencing

Identifiers

PMID36040163
PMCPMC9602439
OpenAlexW4293567504

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.