Evidence map›Paper›PMID 36040159›Full record

ArticleMicrobiology spectrum2022

Dysbiotic Oral and Gut Viromes in Untreated and Treated Rheumatoid Arthritis Patients.

Ruochun Guo, Shenghui Li, Yu Zhang, Yue Zhang, Guangyang Wang, Hayan Ullah, Yufang Ma, Qiulong Yan

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Oral virome in health and disease.Journal of the American Dental Association (1939) · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. GUTAID: a curated database linking gut microbial antigens to autoimmune mechanisms.Database : the journal of biological databases and curation · 2026
    Article
  8. Review
  9. Review
  10. Review
  11. Microbial threads in the tapestry of rheumatoid arthritis.The Journal of clinical investigation · 2025
    Review
  12. Article
  13. Alterations of the Enteric Virome in Vogt-Koyanagi-Harada Disease.Investigative ophthalmology & visual science · 2025
    Article
  14. Article
  15. Saliva assay: a call for methodological standardization.Journal of periodontal & implant science · 2025
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ruochun GuoDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical Universitygrid.411971.b, Dalian, China.
Shenghui LiPuensum Genetech Institute, Wuhan, China.
Yu ZhangPuensum Genetech Institute, Wuhan, China.
Yue ZhangPuensum Genetech Institute, Wuhan, China.
Guangyang WangDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical Universitygrid.411971.b, Dalian, China.
Hayan UllahDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical Universitygrid.411971.b, Dalian, China.
Yufang MaDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical Universitygrid.411971.b, Dalian, China.
Qiulong YanDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical Universitygrid.411971.b, Dalian, China.ORCID 0000-0002-2697-4562
Dalian Medical University · CNChina Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rheumatoid arthritis (RA) is influenced by oral and gut bacteria; however, much less is known about the relationship between oral or gut viromes and RA. Here, we performed whole-oral- and whole-gut-virome analyses based on shotgun sequencing of 497 samples. A comparative analysis of the oral and gut viromes in healthy controls and untreated and treated RA patients was performed, and system interaction networks among viruses, bacteria, and RA-associated clinical indices were constructed to address the potential relationship between the virome and RA by principal-coordinate analysis, distance-based redundancy analysis, permutational multivariate analysis, Spearman correlation coefficient analysis, and random-forest model analysis. The results showed that the viromes could be profiled in dental plaque, saliva, and fecal samples, among which saliva had the highest within-sample diversity. Importantly, significantly different diversities and compositions of the oral (i.e., dental plaque and saliva) viromes were observed not only between RA patients and healthy controls but also between untreated and treated RA patients, yet there were relatively minor differences in the gut viromes. Furthermore, to understand how these viruses affected the bacteriome, a virus-bacterium interaction network was constructed from dental plaque, saliva, and fecal samples of RA patients. Additionally, some RA-associated oral taxa, including

Indexed as

Arthritis, RheumatoidDental PlaqueVirusesBacteriaDysbiosisHumansViromecommunity variationmicrobiomeoral and gutrheumatoid arthritisvirome

Identifiers

PMID36040159
PMCPMC9603985
OpenAlexW4293567381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.