Evidence map›Paper›PMID 36040023›Full record

ArticleThe journal of physical chemistry letters2022

Improving the Brightness of Pyronin Fluorophore Systems through Quantum-Mechanical Predictions.

Brandon Walls, Olabisi Suleiman, Carlos Arambula, Alyssa Hall, Olajumoke Adeyiga, Fadel Boumelhem, Jungjae Koh, Samuel O Odoh, Zachary R Woydziak

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Brandon WallsDepartment of Physical and Life Sciences, Nevada State College, Henderson, Nevada 89002, United States.
Olabisi SuleimanDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, United States.
Carlos ArambulaDepartment of Physical and Life Sciences, Nevada State College, Henderson, Nevada 89002, United States.
Alyssa HallDepartment of Physical and Life Sciences, Nevada State College, Henderson, Nevada 89002, United States.
Olajumoke AdeyigaDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, United States.ORCID 0000-0002-2359-8928
Fadel BoumelhemDepartment of Physical and Life Sciences, Nevada State College, Henderson, Nevada 89002, United States.
Jungjae KohDepartment of Chemistry and Biochemistry, University of Nevada, Las Vegas, Nevada 89154, United States.
Samuel O OdohDepartment of Chemistry, University of Nevada, Reno, Nevada 89557, United States.ORCID 0000-0002-6633-8229
Zachary R WoydziakDepartment of Physical and Life Sciences, Nevada State College, Henderson, Nevada 89002, United States.ORCID 0000-0002-7842-4802

Funding

Outreach/Diversity/Pipeline ProjectP20GM103440 · NIGMS · UNIVERSITY OF NEVADA RENO · PI Julia Petereit · 2012 to 2026
$58.0M
NIGMS NIH HHS P20 GM103440
6 · The paper itself

Abstract

The pyronin class of fluorophores serves a critical role in numerous imaging applications, particularly involving preferential staining of RNA through base pair intercalation. Despite this important role in molecular staining applications, the same set of century-old pyronins (i.e., pyronin Y (PY) and pyronin B (PB)), which possess relatively low fluorophore brightness, are still predominantly being used due to the lack of methodology for generating enhanced variants. Here, we use TD-DFT calculations of interconversion energies between structures on the S

Indexed as

PyronineRNAFluorescent DyesMolecular StructureStaining and LabelingFluorescent DyesPyronineRNA

Identifiers

PMID36040023
PMCPMC10543078

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.