Evidence map›Paper›PMID 36039643›Full record

ArticleImmunity, inflammation and disease2022

Identification of an immune-related gene signature as a prognostic target and the immune microenvironment for adrenocortical carcinoma.

Chengdang Xu, Caipeng Qin, Jingang Jian, Yun Peng, Xinan Wang, Xi Chen, Denglong Wu, Yuxuan Song

Open access · goldAbstract read
In one paragraph

Article in Immunity, inflammation and disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Chengdang XuDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.ORCID 0000-0001-9253-2458
Caipeng QinDepartment of Urology, Peking University People's Hospital, Beijing, China.
Jingang JianDepartment of Urology, The First Affiliated Hospital of Soochow University, Dushu Lake Hospital Affiliated to Soochow University, Suzhou Medical College of Soochow University, Suzhou, China.
Yun PengDepartment of Urology, Peking University People's Hospital, Beijing, China.
Xinan WangDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.
Xi ChenDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.
Denglong WuDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.
Yuxuan SongDepartment of Urology, Peking University People's Hospital, Beijing, China.
Tongji University · CNPeking University · CNSoochow University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAdrenocortical carcinoma (ACC) is a rare endocrine malignancy. Even with complete tumor resection and adjuvant therapies, the prognosis of patients with ACC remains unsatisfactory. In the microtumor environment, the impact of a disordered immune system and abnormal immune responses is enormous. To improve treatment, novel prognostic predictors and treatment targets for ACC need to be identified. Hence, credible prognostic biomarkers of immune-associated genes (IRGs) should be explored and developed. MATERIAL AND

methodsWe downloaded RNA-sequencing data and clinical data from The Cancer Genome Atlas (TCGA) data set, Genotype-Tissue Expression data set, and Gene Expression Omnibus data set. Gene set enrichment analysis (GSEA) was applied to reveal the potential functions of differentially expressed genes.

resultsGSEA indicated an association between ACC and immune-related functions. We obtained 332 IRGs and constructed a prognostic signature on the strength of 3 IRGs (INHBA, HELLS, and HDAC4) in the training cohort. The high-risk group had significantly poorer overall survival than the low-risk group (p < .001). Multivariate Cox regression was performed with the signature as an independent prognostic indicator for ACC. The testing cohort and the entire TCGA ACC cohort were utilized to validate these findings. Moreover, external validation was conducted in the GSE10927 and GSE19750 cohorts. The tumor-infiltrating immune cells analysis indicated that the quantity of T cells, natural killer cells, macrophage cells, myeloid dendritic cells, and mast cells in the immune microenvironment differed between the low-risk and high-risk groups.

conclusionOur three-IRG prognostic signature and the three IRGs can be used as prognostic indicators and potential immunotherapeutic targets for ACC. Inhibitors of the three novel IRGs might activate immune cells and play a synergistic role in combination therapy with immunotherapy for ACC in the future.

Indexed as

Adrenal Cortex NeoplasmsAdrenocortical CarcinomaBiomarkers, TumorGene Expression Regulation, NeoplasticHumansPrognosisTumor MicroenvironmentBiomarkers, Tumoradrenocortical carcinomaimmunologyprognosissignaturestumor microenvironment

Identifiers

PMID36039643
PMCPMC9382862
OpenAlexW4292092651

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.