Evidence map›Paper›PMID 36038577›Full record

ArticleNature communications2022

PIF7 is a master regulator of thermomorphogenesis in shade.

Yogev Burko, Björn Christopher Willige, Adam Seluzicki, Ondřej Novák, Karin Ljung, Joanne Chory

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. In Vivo Detection of IAA Using IAA Nanosensor.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yogev BurkoInstitute of Plant Sciences, ARO, Volcani Institute, HaMaccabbim Road 68, Rishon LeZion, 7505101, Israel. yogevb@volcani.agri.gov.il.ORCID 0000-0002-3607-6280
Björn Christopher WilligeHoward Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.ORCID 0000-0003-4275-5826
Adam SeluzickiHoward Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
Ondřej NovákLaboratory of Growth Regulators, Faculty of Science, Palacký University and Institute of Experimental Botany, The Czech Academy of Sciences, Šlechtitelů 27, CZ-78371, Olomouc, Czech Republic.
Karin LjungUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83, Umeå, Sweden.ORCID 0000-0003-2901-189X
Joanne ChoryHoward Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA. chory@salk.edu.ORCID 0000-0002-3664-8525

Funding

Mechanisms Controlling Hormone-Mediated Plant Growth in Response to the EnvironmentR35GM122604 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CHORY, JOANNE · 2017 to 2021
$2.0M
Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM122604
6 · The paper itself

Abstract

The size of plant organs is highly responsive to environmental conditions. The plant's embryonic stem, or hypocotyl, displays phenotypic plasticity, in response to light and temperature. The hypocotyl of shade avoiding species elongates to outcompete neighboring plants and secure access to sunlight. Similar elongation occurs in high temperature. However, it is poorly understood how environmental light and temperature cues interact to effect plant growth. We found that shade combined with warm temperature produces a synergistic hypocotyl growth response that dependent on PHYTOCHROME-INTERACTING FACTOR 7 (PIF7) and auxin. This unique but agriculturally relevant scenario was almost totally independent on PIF4 activity. We show that warm temperature is sufficient to promote PIF7 DNA binding but not transcriptional activation and we demonstrate that additional, unknown factor/s must be working downstream of the phyB-PIF-auxin module. Our findings will improve the predictions of how plants will respond to increased ambient temperatures when grown at high density.

Indexed as

ArabidopsisArabidopsis ProteinsPhytochromeBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsFactor VIIGene Expression Regulation, PlantHypocotylIndoleacetic AcidsLightArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsFactor VIIIndoleacetic AcidsPhytochromePIF7 protein, Arabidopsis

Identifiers

PMID36038577
PMCPMC9424238

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.