Evidence map›Paper›PMID 36038184›Full record

ArticleJournal of veterinary science2022

Molecular characterization of chicken anemia virus in Guangxi Province, southern China, from 2018 to 2020.

Minxiu Zhang, Xianwen Deng, Zhixun Xie, Yanfang Zhang, Zhiqin Xie, Liji Xie, Sisi Luo, Qing Fan, Tingting Zeng, Jiaoling Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  8. Gyrovirus: current status and challenge.Frontiers in microbiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Minxiu Zhang *Guangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0001-5151-4915
Xianwen Deng *Guangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0003-1434-9169
Zhixun XieGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China. xiezhixun@126.com.ORCID https://orcid.org/0000-0002-1924-9952
Yanfang ZhangGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0002-5055-4410
Zhiqin XieGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0003-0752-060X
Liji XieGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0003-0295-832X
Sisi LuoGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0001-8202-6121
Qing FanGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0003-4752-2693
Tingting ZengGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID http://orcid.org/0000-0002-6038-2843
Jiaoling HuangGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0002-5152-7625
Sheng WangGuangxi Key Laboratory of Veterinary Biotechnology, Guangxi Veterinary Research Institute, Nanning, Guangxi 530001, China.ORCID https://orcid.org/0000-0001-5931-1602
Guangxi Veterinary Research Institute · CN

Funding

Bagui Scholars Program of Guangxi Zhuang Autonomous Region 2019A50Guangxi Science Base and Talents Special Program AD17195083Guangxi Science Great Special Program AA17204057
6 · The paper itself

Abstract

backgroundChicken anemia virus (CAV) causes chicken infectious anemia, which results in immunosuppression; the virus has spread widely in chicken flocks in China.

objectivesThe aim of this study was to understand recent CAV genetic evolution in chicken flocks in Guangxi Province, southern China.

methodsIn total, 350 liver samples were collected from eight commercial broiler chicken farms in Guangxi Province in southern China from 2018 to 2020. CAV was detected by conventional PCR, and twenty CAV complete genomes were amplified and used for the phylogenetic analysis and recombination analysis.

resultsThe overall CAV-positive rate was 17.1%. The genetic analysis revealed that 84 CAVs were distributed in groups A, B, C (subgroups C1-C3) and D. In total, 30 of 47 Chinese CAV sequences from 2005-2020 belong to subgroup C3, including 15 CAVs from this study. There were some specific mutation sites among the intergenotypes in the VP1 protein. The amino acids at position 394Q in the VP1 protein of 20 CAV strains were consistent with the characteristics of a highly pathogenic strain. GX1904B was a putative recombinant.

conclusionsSubgroup C3 was the dominant genotype in Guangxi Province from 2018-2020. The 20 CAV strains in this study might be virulent according to the amino acid residue analysis. These data help improve our understanding of the epidemiological trends of CAV in southern China.

Indexed as

Chicken anemia virusCircoviridae InfectionsPoultry DiseasesAmino AcidsAnimalsChickensChinaPhylogenySequence Analysis, DNAAmino Acidschicken anemia virusChinageneticsgenomerecombination

Identifiers

PMID36038184
PMCPMC9523344
OpenAlexW4285744280

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.