Evidence map›Paper›PMID 36037235›Full record

ArticlePloS one2022

Genomic characterization of Staphylococcus aureus isolates causing osteoarticular infections in otherwise healthy children.

Walter Dehority, Valerie J Morley, Daryl B Domman, Seth M Daly, Kathleen D Triplett, Kylie Disch, Rebekkah Varjabedian, Aimee Yousey, Parisa Mortaji, Deirdre Hill and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Surgical management of chronic osteomyelitis: Organisms, recurrence and treatment outcome.Chinese journal of traumatology = Zhonghua chuang shang za zhi · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Walter DehorityDepartment of Pediatrics, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.ORCID 0000-0003-3785-7537
Valerie J MorleyDepartment of Internal Medicine, The University of New Mexico School of Medicine, Center for Global Health, Albuquerque, New Mexico, United States of America.
Daryl B DommanDepartment of Internal Medicine, The University of New Mexico School of Medicine, Center for Global Health, Albuquerque, New Mexico, United States of America.
Seth M DalyDepartment of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, New Mexico, United States of America.
Kathleen D TriplettDepartment of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, New Mexico, United States of America.
Kylie DischDepartment of Pediatrics, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.
Rebekkah VarjabedianThe University of New Mexico, Albuquerque, New Mexico, United States of America.ORCID 0000-0002-2444-5595
Aimee YouseyDepartment of Emergency Medicine, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.
Parisa MortajiDepartment of Internal Medicine, The University of Colorado School of Medicine, Aurora, Colorado, United States of America.
Deirdre HillThe University of New Mexico Clinical and Translational Science Center, Albuquerque, New Mexico, United States of America.
Olufunmilola OyebamijiDivision of Molecular Medicine, The University of New Mexico, Albuquerque, New Mexico, United States of America.ORCID 0000-0003-3859-9787
Yan GuoDivision of Molecular Medicine, The University of New Mexico, Albuquerque, New Mexico, United States of America.
Kurt SchwalmDepartment of Pediatrics, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.
Pamela R HallDepartment of Pharmaceutical Sciences, The University of New Mexico College of Pharmacy, Albuquerque, New Mexico, United States of America.
Darrell DinwiddieDepartment of Pediatrics, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.
Jon FemlingDepartment of Emergency Medicine, The University of New Mexico School of Medicine, Albuquerque, New Mexico, United States of America.
University of New Mexico · USUniversity of Colorado Denver · US

Funding

UNM HSC Clinical and Translational Science CenterUL1TR001449 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CAMPEN, MATTHEW J, PANDHI, NANCY · 2015 to 2024
$36.9M
Vaccine-mediated control of bacterial virulence regulation and infectionR01AI145324 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DALY, SETH MICHAEL · 2019 to 2023
$2.0M
NCATS NIH HHS UL1 TR001449NIAID NIH HHS R01 AI145324
6 · The paper itself

Abstract

backgroundPediatric osteoarticular infections are commonly caused by Staphylococcus aureus. The contribution of S. aureus genomic variability to pathogenesis of these infections is poorly described.

methodsWe prospectively enrolled 47 children over 3 1/2 years from whom S. aureus was isolated on culture-12 uninfected with skin colonization, 16 with skin abscesses, 19 with osteoarticular infections (four with septic arthritis, three with acute osteomyelitis, six with acute osteomyelitis and septic arthritis and six with chronic osteomyelitis). Isolates underwent whole genome sequencing, with assessment for 254 virulence genes and any mutations as well as creation of a phylogenetic tree. Finally, isolates were compared for their ability to form static biofilms and compared to the genetic analysis.

resultsNo sequence types predominated amongst osteoarticular infections. Only genes involved in evasion of host immune defenses were more frequently carried by isolates from osteoarticular infections than from skin colonization (p = .02). Virulence gene mutations were only noted in 14 genes (three regulating biofilm formation) when comparing isolates from subjects with osteoarticular infections and those with skin colonization. Biofilm results demonstrated large heterogeneity in the isolates' capacity to form static biofilms, with healthy control isolates producing more robust biofilm formation.

conclusionsS. aureus causing osteoarticular infections are genetically heterogeneous, and more frequently harbor genes involved in immune evasion than less invasive isolates. However, virulence gene carriage overall is similar with infrequent mutations, suggesting that pathogenesis of S. aureus osteoarticular infections may be primarily regulated at transcriptional and/or translational levels.

Indexed as

Arthritis, InfectiousOsteomyelitisStaphylococcal InfectionsAnti-Bacterial AgentsBiofilmsChildGenomicsHumansPhylogenyStaphylococcus aureusVirulence FactorsAnti-Bacterial AgentsVirulence Factors

Identifiers

PMID36037235
PMCPMC9423648
OpenAlexW4293469539

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.