Evidence map›Paper›PMID 36037231›Full record

ArticlePLoS genetics2022

Repression of essential cell cycle genes increases cellular fitness.

Michelle M Conti, Julie M Ghizzoni, Ana Gil-Bona, Wen Wang, Michael Costanzo, Rui Li, Mackenzie J Flynn, Lihua Julie Zhu, Chad L Myers, Charles Boone and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Michelle M ContiDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Julie M GhizzoniDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0002-9502-9951
Ana Gil-BonaDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0003-2137-1313
Wen WangDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota, United States of America.
Michael CostanzoDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-7906-2604
Rui LiDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0003-3193-1396
Mackenzie J FlynnDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0001-7743-1157
Lihua Julie ZhuDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0001-7416-0590
Chad L MyersDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota, United States of America.ORCID 0000-0002-1026-5972
Charles BooneDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Brenda J AndrewsDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0001-6427-6493
Jennifer A BenantiDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0003-2484-5721
University of Massachusetts Chan Medical School · USUniversity of Toronto · CAUniversity of Minnesota · US

Funding

Mapping the reference genetic network of a eukaryotic cellR01HG005853 · NHGRI · UNIVERSITY OF TORONTO · PI ANDREWS, BRENDA JEAN, BOONE, CHARLES · 2010 to 2025
$7.6M
Molecular Mechanisms of Cell Cycle ControlR35GM136280 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Jennifer A Benanti · 2020 to 2026
$4.8M
Cell cycle regulation of chromosome structureR01GM115708 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BENANTI, JENNIFER A · 2016 to 2020
$1.8M
Rewiring cell cycle-regulated transcription in response to stressR01GM117152 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BENANTI, JENNIFER A · 2016 to 2019
$1.4M
CIHR FDN-143264CIHR FDN-143265NHGRI NIH HHS R01 HG005853NIGMS NIH HHS R01 GM115708NIGMS NIH HHS R01 GM117152NIGMS NIH HHS R35 GM136280
6 · The paper itself

Abstract

A network of transcription factors (TFs) coordinates transcription with cell cycle events in eukaryotes. Most TFs in the network are phosphorylated by cyclin-dependent kinase (CDK), which limits their activities during the cell cycle. Here, we investigate the physiological consequences of disrupting CDK regulation of the paralogous repressors Yhp1 and Yox1 in yeast. Blocking Yhp1/Yox1 phosphorylation increases their levels and decreases expression of essential cell cycle regulatory genes which, unexpectedly, increases cellular fitness in optimal growth conditions. Using synthetic genetic interaction screens, we find that Yhp1/Yox1 mutations improve the fitness of mutants with mitotic defects, including condensin mutants. Blocking Yhp1/Yox1 phosphorylation simultaneously accelerates the G1/S transition and delays mitotic exit, without decreasing proliferation rate. This mitotic delay partially reverses the chromosome segregation defect of condensin mutants, potentially explaining their increased fitness when combined with Yhp1/Yox1 phosphomutants. These findings reveal how altering expression of cell cycle genes leads to a redistribution of cell cycle timing and confers a fitness advantage to cells.

Indexed as

Genes, cdcSaccharomyces cerevisiae ProteinsCell CycleCell Cycle ProteinsCyclin-Dependent KinasesMitosisPhosphorylationSaccharomyces cerevisiaeTranscription FactorsCell Cycle ProteinsCyclin-Dependent KinasesSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID36037231
PMCPMC9462756
OpenAlexW4293469890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.