Evidence map›Paper›PMID 36035153›Full record

ArticleFrontiers in genetics2022

Identifying gene variants underlying the pathogenesis of diabetic retinopathy based on integrated genomic and transcriptomic analysis of clinical extreme phenotypes.

Qiaoling Song, Yuchao Zhang, Minghui Zhang, Xiaoli Ma, Qianyue Zhang, Chenyang Zhao, Zhongwen Zhang, Huichen Zhao, Wenchao Hu, Xinxin Zhang and 4 more

Abstract read
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Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

14 authors.

Qiaoling SongSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Yuchao ZhangDepartment of Endocrinology, Qingdao Municipal Hospital, Qingdao, China.
Minghui ZhangSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Xiaoli MaDepartment of Endocrinology, Qingdao Municipal Hospital, Qingdao, China.
Qianyue ZhangSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Chenyang ZhaoSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Zhongwen ZhangDepartment of Endocrinology and Metabolism, the First Affiliated Hospital of Shandong First Medical University and Shandong Provincial Qianfoshan Hospital, Jinan, China.
Huichen ZhaoDepartment of Endocrinology, Qingdao Municipal Hospital, Qingdao, China.
Wenchao HuDepartment of Endocrinology, Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao, China.
Xinxin ZhangSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Xiwen RenDepartment of Emergency, Linyi People's Hospital, Linyi, China.
Ming AnDepartment of Ophthalmology, Qingdao Municipal Hospital, Qingdao, China.
Jinbo YangSchool of Medicine and Pharmacy, Ocean University of China, Qingdao, China.
Yuantao LiuDepartment of Endocrinology, Qilu Hospital (Qingdao), Cheeloo College of Medicine, Shandong University, Qingdao, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diabetic retinopathy (DR) is a common complication and the leading cause of blindness in patients with type 2 diabetes. DR has been shown to be closely correlated with blood glucose levels and the duration of diabetes. However, the onset and progression of DR also display clinical heterogeneity. We applied whole-exome sequencing and RNA-seq approaches to study the gene mutation and transcription profiles in three groups of diabetic patients with extreme clinical phenotypes in DR onset, timing, and disease progression, aiming to identify genetic variants that may play roles in the pathogenesis of DR. We identified 23 putatively pathogenic genes, and ingenuity pathway analysis of these mutated genes reveals their functional association with glucose metabolism, diabetic complications, neural system activity, and dysregulated immune responses. In addition, ten potentially protective genes were also proposed. These findings shed light on the mechanisms underlying the pathogenesis of DR and may provide potential targets for developing new strategies to combat DR.

Indexed as

diabetic retinopathyexome sequencingpathogenic mutationrare variantsRNA-seq analysis

Identifiers

PMID36035153
PMCPMC9399422

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.