Evidence map›Paper›PMID 36034595›Full record

ArticleFrontiers in artificial intelligence2022

Rare disease-based scientific annotation knowledge graph.

Qian Zhu, Chunxu Qu, Ruizheng Liu, Gunjan Vatas, Andrew Clough, Ðắc-Trung Nguyễn, Eric Sid, Ewy Mathé, Yanji Xu

Abstract read
In one paragraph

Article in Frontiers in artificial intelligence, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Qian ZhuDivision of Pre-clinical Innovation, National Center for Advancing Translational Sciences, Rockville, MD, United States.
Chunxu QuDivision of Rare Diseases Research Innovation, National Center for Advancing Translational Sciences, Bethesda, MD, United States.
Ruizheng LiuDivision of Rare Diseases Research Innovation, National Center for Advancing Translational Sciences, Bethesda, MD, United States.
Gunjan VatasGMG ArcData, LLC, Washington, DC, United States.
Andrew CloughData Decode, LLC, Washington, DC, United States.
Ðắc-Trung NguyễnDigital R&D Solutions, Pfizer, New York, NY, United States.
Eric SidDivision of Rare Diseases Research Innovation, National Center for Advancing Translational Sciences, Bethesda, MD, United States.
Ewy MathéDivision of Pre-clinical Innovation, National Center for Advancing Translational Sciences, Rockville, MD, United States.
Yanji XuDivision of Rare Diseases Research Innovation, National Center for Advancing Translational Sciences, Bethesda, MD, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rare diseases (RDs) are naturally associated with a low prevalence rate, which raises a big challenge due to there being less data available for supporting preclinical and clinical studies. There has been a vast improvement in our understanding of RD, largely owing to advanced big data analytic approaches in genetics/genomics. Consequently, a large volume of RD-related publications has been accumulated in recent years, which offers opportunities to utilize these publications for accessing the full spectrum of the scientific research and supporting further investigation in RD. In this study, we systematically analyzed, semantically annotated, and scientifically categorized RD-related PubMed articles, and integrated those semantic annotations in a knowledge graph (KG), which is hosted in Neo4j based on a predefined data model. With the successful demonstration of scientific contribution in RD

Indexed as

knowledge graphnatural language processingPubMedrare disease (RD)scientific annotations

Identifiers

PMID36034595
PMCPMC9403737

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.