Evidence map›Paper›PMID 36034394›Full record

ArticleFrontiers in surgery2022

High Expression of TIMELESS Predicts Poor Prognosis: A Potential Therapeutic Target for Skin Cutaneous Melanoma.

Shixin Zhao, Shifeng Wen, Hengdeng Liu, Ziheng Zhou, Yiling Liu, Jinbao Zhong, Julin Xie

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Article in Frontiers in surgery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Shixin ZhaoDepartment of Burn Surgery, First Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.
Shifeng WenDepartment of Orthopedics, Guangzhou First People's Hospital, School of Medicine, South China University of Technology, Guangzhou, China.
Hengdeng LiuDepartment of Burn Surgery, First Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.
Ziheng ZhouDepartment of Burn Surgery, First Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.
Yiling LiuDepartment of Burn Surgery, First Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.
Jinbao ZhongDepartment of Dermatology, Guangzhou Institute of Dermatology, Guangzhou, China.
Julin XieDepartment of Burn Surgery, First Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Skin cutaneous melanoma (SKCM) is the most lethal skin cancer with an increasing incidence worldwide. The poor prognosis of SKCM urgently requires us to discover prognostic biomarkers for accurate therapy. As a regulator of DNA replication, TIMELESS (TIM) has been found to be highly expressed in various malignancies but rarely reported in SKCM. The objective of this study was to evaluate the relationship between TIM and SKCM tumorigenesis and prognosis. Methods: We obtained RNA sequencing data from TCGA and GTEx to analyze TIM expression and differentially expressed genes (DEGs). Subsequently, GO/KEGG, GSEA, immune cell infiltration analysis, and protein-protein interaction (PPI) network were used to perform the functional enrichment analysis of TIM-related DEGs. Moreover, the receiver operating characteristic (ROC) curves, Cox regression analysis, Kaplan-Meier (K-M) analysis, and nomograms were applied to figure out the clinical significance of TIM in SKCM. In addition, we investigated the relationship between TIM promoter methylation and SKCM prognosis through the UALCAN database. Finally, the immunohistochemical (IHC) results of normal skin and SKCM were analyzed to determine expression differences. Results: TIM was significantly elevated in various malignancies, including SKCM, and high expression of TIM was associated with poor prognosis. Moreover, a total of 402 DEGs were identified between the two distinct TIM expression groups, and functional annotation showed enrichment with positive regulation of cell cycle and classic oncogenic pathways in the high TIM expression phenotype, while keratinization pathways were negatively regulated and enriched. Further analysis showed that TIM was correlated with infiltration of multiple immune cells. Finally, IHC validated the differential expression of TIM in SKCM. Conclusion: TIM might play a pivotal role in tumorigenesis of SKCM and is closely related to its prognosis.

Indexed as

bioinformaticsimmune infiltrationoverall survivalprognostic signatureskin cutaneous melanomatimeless

Identifiers

PMID36034394
PMCPMC9406824

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.