Evidence map›Paper›PMID 36028578›Full record

ArticleScientific reports2022

Simultaneously induced mutations in eIF4E genes by CRISPR/Cas9 enhance PVY resistance in tobacco.

Ngoc Thu Le, Huyen Thi Tran, Thao Phuong Bui, Giang Thu Nguyen, Doai Van Nguyen, Dong Thi Ta, Duy Dinh Trinh, Attila Molnar, Ngoc Bich Pham, Ha Hoang Chu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Hydroponic Growth of [Journal of agricultural and food chemistry · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Ngoc Thu LeInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Huyen Thi TranInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Thao Phuong BuiInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Giang Thu NguyenInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Doai Van NguyenInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Dong Thi TaInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Duy Dinh TrinhInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Attila MolnarInstitute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, UK.
Ngoc Bich PhamInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Ha Hoang ChuInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam. chuhoangha@ibt.ac.vn.
Phat Tien DoInstitute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Vietnam. dtphat@ibt.ac.vn.
Vietnam Academy of Science and Technology · VNUniversity of Edinburgh · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tobacco is an important commercial crop and a rich source of alkaloids for pharmaceutical and agricultural applications. However, its yield can be reduced by up to 70% due to virus infections, especially by a potyvirus Potato virus Y (PVY). The replication of PVY relies on host factors, and eukaryotic translation initiation factor 4Es (eIF4Es) have already been identified as recessive resistance genes against potyviruses in many plant species. To investigate the molecular basis of PVY resistance in the widely cultivated allotetraploid tobacco variety K326, we developed a dual guide RNA CRISPR/Cas9 system for combinatorial gene editing of two clades, eIF4E1 (eIF4E1-S and eIF4E1-T) and eIF4E2 (eIF4E2-S and eIF4E2-T) in the eIF4E gene family comprising six members in tobacco. We screened for CRISPR/Cas9-induced mutations by heteroduplex analysis and Sanger sequencing, and monitored PVY

Indexed as

PotyvirusSolanum tuberosumCRISPR-Cas SystemsMutationNicotianaPlant Diseases

Identifiers

PMID36028578
PMCPMC9418239
OpenAlexW4293778800

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.