Evidence map›Paper›PMID 36028497›Full record

ArticleNature communications2022

Decomposing virulence to understand bacterial clearance in persistent infections.

Beatriz Acuña Hidalgo, Luís M Silva, Mathias Franz, Roland R Regoes, Sophie A O Armitage

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Virulence · 2025
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  10. Pathogen growth and virulence dynamics drive the host evolution against coinfections.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Review
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  19. Article
  20. Virulence decomposition for bifurcating infections.Proceedings. Biological sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Beatriz Acuña Hidalgo *Institute of Biology, Freie Universität Berlin, Berlin, Germany.
Luís M Silva *Institute of Biology, Freie Universität Berlin, Berlin, Germany.ORCID 0000-0002-8203-4006
Mathias Franz *Institute of Biology, Freie Universität Berlin, Berlin, Germany.ORCID 0000-0001-5111-6503
Roland R RegoesInstitute of Integrative Biology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0001-8319-5293
Sophie A O ArmitageInstitute of Biology, Freie Universität Berlin, Berlin, Germany. sophie.armitage@fu-berlin.de.ORCID 0000-0002-5561-9543
Freie Universität Berlin · DEETH Zurich · CHUniversity of Neuchâtel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Following an infection, hosts cannot always clear the pathogen, instead either dying or surviving with a persistent infection. Such variation is ecologically and evolutionarily important because it can affect infection prevalence and transmission, and virulence evolution. However, the factors causing variation in infection outcomes, and the relationship between clearance and virulence are not well understood. Here we show that sustained persistent infection and clearance are both possible outcomes across bacterial species showing a range of virulence in Drosophila melanogaster. Variation in virulence arises because of differences in the two components of virulence: bacterial infection intensity inside the host (exploitation), and the amount of damage caused per bacterium (per parasite pathogenicity). As early-phase exploitation increased, clearance rates later in the infection decreased, whereas there was no apparent effect of per parasite pathogenicity on clearance rates. Variation in infection outcomes is thereby determined by how virulence - and its components - relate to the rate of pathogen clearance. Taken together we demonstrate that the virulence decomposition framework is broadly applicable and can provide valuable insights into host-pathogen interactions.

Indexed as

Biological EvolutionParasitesAnimalsBacteriaDrosophila melanogasterPersistent InfectionVirulence

Identifiers

PMID36028497
PMCPMC9418333
OpenAlexW4293109285

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.