Evidence map›Paper›PMID 36026500›Full record

ArticlePloS one2022

Characterization of the virulence of three novel clade 2 Clostridioides (Clostridium) difficile strains and a two-year screening in animals and humans in Brazil.

Amanda Nadia Diniz, Loren Nery Fontoura Moura, Diogo Soares Gonçalves Cruz, Carlos Augusto Oliveira Junior, Henrique César Pereira Figueiredo, João Luís Reis Cunha, Eduardo Garcia Vilela, Edward J Kuijper, Mark H Wilcox, Francisco Carlos Faria Lobato and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. The state of play of rodent models for the study ofJournal of medical microbiology · 2024
    Review
  4. Microorganisms · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Amanda Nadia DinizDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID 0000-0002-5287-5779
Loren Nery Fontoura MouraDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
Diogo Soares Gonçalves CruzDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID 0000-0002-8577-6849
Carlos Augusto Oliveira JuniorDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
Henrique César Pereira FigueiredoDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
João Luís Reis CunhaDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
Eduardo Garcia VilelaClinic Hospital of Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.
Edward J KuijperExpertise Center for Clostridioides difficile infections, at Department of Medical Microbiology, Leiden University Medical Center, Leiden, and the National Institute for Public Health and the Environment, Bilthoven, The Netherlands.
Mark H WilcoxInstitute of Biomedical and Clinical Sciences, University of Leeds, Leeds, United Kingdom.ORCID 0000-0002-4565-2868
Francisco Carlos Faria LobatoDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.
Rodrigo Otávio Silveira SilvaDepartment of Preventive Veterinary Medicine Federal University of Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil.ORCID 0000-0003-0074-2488
Universidade Federal de Minas Gerais · BRLeiden University Medical Center · NLUniversity of Leeds · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridioides (Clostridium) difficile infection (CDI) is an evolving global healthcare problem, and owing to the diverse and dynamic molecular epidemiology of C. difficile, new strains continue to emerge. In Brazil, only two cases of CDI due to the so called hypervirulent PCR ribotype (RT) 027 belonging to clade 2 have ever been reported, whereas incidence of CDI due to another "hypervirulent" RT078 (clade 5) has not yet been reported. In contrast, novel clade 2 strains have been identified in different hospitals. To better understand the epidemiology of CDIs in Brazil, this study aimed to genotypically and phenotypically characterize three novel Brazilian clade 2 strains (RT883, 884, and 885) isolated from patients with confirmed CDI. In addition, to better understand the circulating RTs, a two-year sampling was conducted in patients from the same hospital and in several domestic and wild animal species. The three strains examined showed lower production of A/B toxins than the control RT027, although two of these strains harbored a truncated tcdC gene. All strains showed swimming motility similar to that of RT027, while RT883 showed higher spore production than the reference strain. In the in vivo hamster model, the lethality of all strains was found to be similar to that of RT027. Both cgMLST and cgMLSA analyses revealed a high genetic similarity among the three-novel clade 2 isolates. In the two-year survey in animals and humans, RT883, 884, and 885 were not detected; however, three new RTs (RT988, RT989, and RT990) were isolated, two of which were genetically related to the three previously reported clade 2 strains. RT106 and RT126 were most frequently detected in humans (47.9%) and animals (57.9%), respectively. Furthermore, RT027 and RT078 were not detected in humans. The results of this study suggest that these novel clade 2 strains have virulence potential and that new strains from clade 2 continue to emerge in our setting, indicating the need for long-term local surveillance.

Indexed as

Clostridioides difficileClostridium InfectionsEnterocolitis, PseudomembranousAnimalsBrazilClostridioidesClostridiumHumansRibotypingVirulence

Identifiers

PMID36026500
PMCPMC9416996
OpenAlexW4293155624

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.