Evidence map›Paper›PMID 36016365›Full record

ArticleViruses2022

Outbreak of Middle East Respiratory Syndrome Coronavirus in Camels and Probable Spillover Infection to Humans in Kenya.

Isaac Ngere, Elizabeth A Hunsperger, Suxiang Tong, Julius Oyugi, Walter Jaoko, Jennifer L Harcourt, Natalie J Thornburg, Harry Oyas, Mathew Muturi, Eric M Osoro and 14 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Designed miniproteins potently inhibit and protect against MERS-CoV.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 3 countries.

Isaac NgereWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.
Elizabeth A HunspergerDivision of Global Health Protection, U.S. Centers for Disease Control and Prevention-Kenya, Nairobi P.O. Box 40241 00621, Kenya.
Suxiang TongDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, U.S. Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Julius OyugiDepartment of Medical Microbiology and Immunology, University of Nairobi, Nairobi P.O. Box 19676 00100, Kenya.
Walter JaokoDepartment of Medical Microbiology and Immunology, University of Nairobi, Nairobi P.O. Box 19676 00100, Kenya.
Jennifer L HarcourtDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, U.S. Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.ORCID 0000-0003-3271-4174
Natalie J ThornburgDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, U.S. Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.ORCID 0000-0003-3523-3616
Harry OyasKenya Ministry of Agriculture, Livestock, Fisheries and Cooperatives, Nairobi P.O. Box 30028 00100, Kenya.
Mathew MuturiKenya Ministry of Agriculture, Livestock, Fisheries and Cooperatives, Nairobi P.O. Box 30028 00100, Kenya.
Eric M OsoroWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.
John GachohiWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.ORCID 0000-0001-9854-7490
Cynthia OmbokWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.
Jeanette DawaWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.
Ying TaoDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, U.S. Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Jing ZhangDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, U.S. Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Lydia MwasiCenter for Global Health Research, Kenya Medical Research Institute, Nairobi P.O. Box 54840 00200, Kenya.
Caroline OchiengCenter for Global Health Research, Kenya Medical Research Institute, Nairobi P.O. Box 54840 00200, Kenya.
Athman MwatondoDepartment of Medical Microbiology and Immunology, University of Nairobi, Nairobi P.O. Box 19676 00100, Kenya.
Boku BodhaDepartment of Veterinary and Livestock, County Government of Marsabit, Marsabit 60500, Kenya.
Daniel LangatKenya Ministry of Health, Nairobi P.O. Box 30016 00100, Kenya.
Amy Herman-RoloffDivision of Global Health Protection, U.S. Centers for Disease Control and Prevention-Kenya, Nairobi P.O. Box 40241 00621, Kenya.
M Kariuki NjengaWashington State University Global Health Program, Washington State University, Nairobi P.O. Box 72938 00200, Kenya.
Marc-Alain WiddowsonDivision of Global Health Protection, U.S. Centers for Disease Control and Prevention-Kenya, Nairobi P.O. Box 40241 00621, Kenya.
Peninah M MunyuaDivision of Global Health Protection, U.S. Centers for Disease Control and Prevention-Kenya, Nairobi P.O. Box 40241 00621, Kenya.ORCID 0000-0003-1950-8616
Centers for Disease Control and Prevention · USCenters for Disease Control and Prevention · KEUniversity of Nairobi · KEWashington State University · USKenya Medical Research Institute · KEMinistry of Agriculture Livestock and Fisheries · KEJomo Kenyatta University of Agriculture and Technology · KEMinistry of Health · KE

Funding

Emerging Infectious Diseases Research Center - East and Central AfricaU01AI151799 · NIAID · WASHINGTON STATE UNIVERSITY · PI M KARIUKI NJENGA · 2020 to 2026
$10.4M
Zoonotic and Emerging Infectious Diseases Training ProgramD43TW011519 · FIC · WASHINGTON STATE UNIVERSITY · PI Walter Godfrey Jaoko, Thumbi Mwangi · 2020 to 2026
$1.2M
ACL HHS U01GH002143CDC HHS CDC 1U01GH002143CGH CDC HHS U01 GH002143FIC NIH HHS D43 TW011519NIAID NIH HHS U01 AI151799
6 · The paper itself

Abstract

The majority of Kenya’s > 3 million camels have antibodies against Middle East respiratory syndrome coronavirus (MERS-CoV), although human infection in Africa is rare. We enrolled 243 camels aged 0−24 months from 33 homesteads in Northern Kenya and followed them between April 2018 to March 2020. We collected and tested camel nasal swabs for MERS-CoV RNA by RT-PCR followed by virus isolation and whole genome sequencing of positive samples. We also documented illnesses (respiratory or other) among the camels. Human camel handlers were also swabbed, screened for respiratory signs, and samples were tested for MERS-CoV by RT-PCR. We recorded 68 illnesses among 58 camels, of which 76.5% (52/68) were respiratory signs and the majority of illnesses (73.5% or 50/68) were recorded in 2019. Overall, 124/4692 (2.6%) camel swabs collected from 83 (34.2%) calves in 15 (45.5%) homesteads between April−September 2019 screened positive, while 22 calves (26.5%) recorded reinfections (second positive swab following ≥ 2 consecutive negative tests). Sequencing revealed a distinct Clade C2 virus that lacked the signature ORF4b deletions of other Clade C viruses. Three previously reported human PCR positive cases clustered with the camel infections in time and place, strongly suggesting sporadic transmission to humans during intense camel outbreaks in Northern Kenya.

Indexed as

Coronavirus InfectionsMiddle East Respiratory Syndrome CoronavirusAnimalsAntibodies, ViralCamelusDisease OutbreaksHumansKenyaZoonosesAntibodies, ViralHorn of AfricaMERS-CoV epidemiologyMiddle East respiratory syndrome coronavirusspillover eventszoonosis

Identifiers

PMID36016365
PMCPMC9413448
OpenAlexW4292066831

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.