Evidence map›Paper›PMID 36016270›Full record

ArticleViruses2022

Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations.

Jérémie Scire, Joëlle Barido-Sottani, Denise Kühnert, Timothy G Vaughan, Tanja Stadler

Abstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  14. Genomic epidemiology ofMicrobial genomics · 2023
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jérémie ScireDepartment of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland.ORCID 0000-0003-0059-645X
Joëlle Barido-SottaniDepartment of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland.ORCID 0000-0002-5220-5468
Denise KühnertTransmission, Infection, Diversification and Evolution Group, Max Planck Institute for the Science of Human History, 07745 Jena, Germany.ORCID 0000-0002-5657-018X
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland.ORCID 0000-0001-6220-2239
Tanja StadlerDepartment of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland.ORCID 0000-0001-6431-535X

Funding

European Research Council 335529
6 · The paper itself

Abstract

The multi-type birth-death model with sampling is a phylodynamic model which enables the quantification of past population dynamics in structured populations based on phylogenetic trees. The BEAST 2 package

Indexed as

AlgorithmsPhylogenyPopulation DynamicsBayesian inferencephylodynamicsphylogeneticspopulation structure

Identifiers

PMID36016270
PMCPMC9413058

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.