Evidence map›Paper›PMID 36015476›Full record

ArticlePlants (Basel, Switzerland)2022

Genetic Characterization of Spring Wheat Germplasm for Macro-, Microelements and Trace Metals.

Alexey Morgounov, Huihui Li, Sergey Shepelev, Mohsin Ali, Paulina Flis, Hamit Koksel, Timur Savin, Vladimir Shamanin

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 5 countries.

Alexey MorgounovAgronomy Department, Omsk State Agrarian University, 644008 Omsk, Russia.
Huihui LiInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences & CIMMYT-China, Beijing 100081, China.
Sergey ShepelevAgronomy Department, Omsk State Agrarian University, 644008 Omsk, Russia.
Mohsin AliInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences & CIMMYT-China, Beijing 100081, China.
Paulina FlisFuture Food Beacon of Excellence and the School of Biosciences, University of Nottingham, Nottingham LE12 5RD, UK.
Hamit KokselAgronomy Department, Omsk State Agrarian University, 644008 Omsk, Russia.
Timur SavinDepartment of Research, S. Seifullin Kazakh Agro Technical University, Nur-Sultan 010011, Kazakhstan.ORCID 0000-0002-3550-647X
Vladimir ShamaninAgronomy Department, Omsk State Agrarian University, 644008 Omsk, Russia.
Omsk State Agrarian University · RUChinese Academy of Agricultural Sciences · CNIstinye University · TRS.Seifullin Kazakh Agro Technical University · KZUniversity of Nottingham · GB

Funding

EU Horizon 2020 EPPN2020 Grant Agreement 731013Ministry of Agriculture and Ministry of Science and Higher Education of the Russian Federation No. 075-15-2021-534 of May 28 2021Russian Science Foundation No. 22-16-20008 of March 23, 2022
6 · The paper itself

Abstract

Wheat as a staple food crop is the main source of micro- and macronutrients for most people of the world and is recognized as an attractive crop for biofortification. This study presents a comprehensive investigation of genomic regions governing grain micro- and macroelements concentrations in a panel of 135 diverse wheat accessions through a genome-wide association study. The genetic diversity panel was genotyped using the genotyping-by-sequencing (GBS) method and phenotyped in two environments during 2017−2018. Wide ranges of variation in nutrient element concentrations in grain were detected among the accessions. Based on 33,808 high-quality single nucleotide polymorphisms (SNPs), 2997 marker-element associations (MEAs) with −log10(p-value) > 3.5 were identified, representing all three subgenomes of wheat for 15-grain concentration elements. The highest numbers of MEAs were identified for Mg (499), followed by S (399), P (394), Ni (381), Cd (243), Ca (229), Mn (224), Zn (212), Sr (212), Cu (111), Rb (78), Fe (63), Mo (43), K (32) and Co (19). Further, MEAs associated with multiple elements and referred to as pleiotropic SNPs were identified for Mg, P, Cd, Mn, and Zn on chromosomes 1B, 2B, and 6B. Fifty MEAs were subjected to validation using KASIB multilocational trial at six sites in two years using 39 genotypes. Gene annotation of MEAs identified putative candidate genes that potentially encode different types of proteins related to disease, metal transportation, and metabolism. The MEAs identified in the present study could be potential targets for further validation and may be used in marker-assisted breeding to improve nutrient element concentrations in wheat grain.

Indexed as

functional genesGWASmacroelementsmicroelementsspring wheattrace metals

Identifiers

PMID36015476
PMCPMC9412593
OpenAlexW4292553580

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.