Evidence map›Paper›PMID 36015462›Full record

ArticlePlants (Basel, Switzerland)2022

Expression Analyses in the Rachis Hint towards Major Cell Wall Modifications in Grape Clusters Showing Berry Shrivel Symptoms.

Stefania Savoi, Suriyan Supapvanich, Heinrich Hildebrand, Nancy Stralis-Pavese, Astrid Forneck, David P Kreil, Michaela Griesser

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Stefania SavoiDepartment of Agricultural, Forest and Food Sciences, University of Turin, 10095 Grugliasco, Italy.ORCID 0000-0002-2665-223X
Suriyan SupapvanichDepartment of Agricultural Education, School of Industrial Education and Technology, King Mongkut's Institute of Technology Ladkrabang, 1 Chalongkrung Road, Ladkrabang, Bangkok 10520, Thailand.ORCID 0000-0002-0931-831X
Heinrich HildebrandInstitute of Viticulture and Pomology, Department of Crop Sciences, University of Natural Resources and Life Sciences, Vienna, 3430 Tulln an der Donau, Austria.
Nancy Stralis-PaveseInstitute of Molecular Biotechnology, Department of Biotechnology, University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
Astrid ForneckInstitute of Viticulture and Pomology, Department of Crop Sciences, University of Natural Resources and Life Sciences, Vienna, 3430 Tulln an der Donau, Austria.
David P KreilInstitute of Molecular Biotechnology, Department of Biotechnology, University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.ORCID 0000-0001-7538-2056
Michaela GriesserInstitute of Viticulture and Pomology, Department of Crop Sciences, University of Natural Resources and Life Sciences, Vienna, 3430 Tulln an der Donau, Austria.ORCID 0000-0002-1756-1264
BOKU University · ATInstitute of Molecular Biotechnology · ATKing Mongkut's Institute of Technology Ladkrabang · THUniversity of Turin · IT

Funding

Austrian Science Fund FWF P 28966FWF Austrian Science Fund P28966-B29
6 · The paper itself

Abstract

Berry shrivel (BS) is one of the prominent and still unresolved ripening physiological disorders in grapevine. The causes of BS are unclear, and previous studies focused on the berry metabolism or histological studies, including cell viability staining in the rachis and berries of BS clusters. Herein, we studied the transcriptional modulation induced by BS in the rachis of pre-symptomatic and symptomatic clusters with a custom-made microarray qPCR in relation to a previous RNASeq study of BS berries. Gene set analysis of transcript expression in symptomatic rachis tissue determined suppression of cell wall biosynthesis, which could also be confirmed already in pre-symptomatic BS rachis by CESA8 qPCR analyses, while in BS berries, a high number of SWITCH genes were suppressed at veraison. Additionally, genes associated with the cell wall were differently affected by BS in berries. A high percentage of hydrolytic enzymes were induced in BS grapes in rachis and berries, while other groups such as, e.g., xyloglucan endotransglucosylase/hydrolase, were suppressed in BS rachis. In conclusion, we propose that modulated cell wall biosynthesis and cell wall assembly in pre-symptomatic BS rachis have potential consequences for cell wall strength and lead to a forced degradation of cell walls in symptomatic grape clusters. The similarity to sugar starvation transcriptional profiles provides a link to BS berries, which are low in sugar accumulation. However, further studies remain necessary to investigate the temporal and spatial coordination in both tissues.

Indexed as

cell wallgene expressionripening disorderVitis vinifera

Identifiers

PMID36015462
PMCPMC9413262
OpenAlexW4292554339

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.