Evidence map›Paper›PMID 36014100›Full record

ArticleMicroorganisms2022

The Gene Expression Profile Differs in Growth Phases of the

Vladimir A Veselovsky, Marina S Dyachkova, Dmitry A Bespiatykh, Roman A Yunes, Egor A Shitikov, Polina S Polyaeva, Valeriy N Danilenko, Evgenii I Olekhnovich, Ksenia M Klimina

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 27 citations in OpenAlex.

  1. Persistence of protozoan parasites andApplied and environmental microbiology · 2026
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  9. Study of the binding of ΔFN3.1 fragments of theMicrobiome research reports · 2023
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Vladimir A VeselovskyDepartment of Biomedicine and Genomics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.ORCID 0000-0002-4336-9452
Marina S DyachkovaDepartment of Biotechnology, Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow 119991, Russia.ORCID 0000-0003-1337-6237
Dmitry A BespiatykhDepartment of Biomedicine and Genomics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.ORCID 0000-0003-0867-5988
Roman A YunesDepartment of Biotechnology, Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow 119991, Russia.ORCID 0000-0001-6283-6258
Egor A ShitikovDepartment of Biomedicine and Genomics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.ORCID 0000-0002-4865-6004
Polina S PolyaevaDepartment of Biological and Medical Physics, Moscow Institute of Physics and Technology, National Research University, Dolgoprudny 141701, Russia.
Valeriy N DanilenkoDepartment of Biotechnology, Vavilov Institute of General Genetics Russian Academy of Sciences, Moscow 119991, Russia.
Evgenii I OlekhnovichDepartment of Biomedicine and Genomics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.
Ksenia M KliminaDepartment of Biomedicine and Genomics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.
Federal Medical-Biological Agency · RUVavilov Institute of General Genetics · RUMoscow Institute of Physics and Technology · RU

Funding

Russian Science Foundation 22-75-10029
6 · The paper itself

Abstract

To date, transcriptomics have been widely and successfully employed to study gene expression in different cell growth phases of bacteria. Since bifidobacteria represent a major component of the gut microbiota of a healthy human that is associated with numerous health benefits for the host, it is important to study them using transcriptomics. In this study, we applied the RNA-Seq technique to study global gene expression of

Indexed as

Bifidobacterium longumDEGsgrowth phaseRNA sequencingtranscriptome

Identifiers

PMID36014100
PMCPMC9415070
OpenAlexW4292566388

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.