Evidence map›Paper›PMID 36012592›Full record

ReviewInternational journal of molecular sciences2022

DNA and RNA Binding Proteins: From Motifs to Roles in Cancer.

Ondrej Bonczek, Lixiao Wang, Sivakumar Vadivel Gnanasundram, Sa Chen, Lucia Haronikova, Filip Zavadil-Kokas, Borivoj Vojtesek

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Exploring the molecular mechanism of Xiao Ji (Asian biomedicine : research, reviews and news · 2025
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. mAmerican journal of cancer research · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ondrej BonczekResearch Centre for Applied Molecular Oncology (RECAMO), Masaryk Memorial Cancer Institute (MMCI), Zluty Kopec 7, 656 53 Brno, Czech Republic.ORCID 0000-0003-0745-3136
Lixiao WangDepartment of Medical Biosciences, Umea University, 90187 Umea, Sweden.
Sivakumar Vadivel GnanasundramDepartment of Medical Biosciences, Umea University, 90187 Umea, Sweden.ORCID 0000-0001-9153-0784
Sa ChenDepartment of Medical Biosciences, Umea University, 90187 Umea, Sweden.
Lucia HaronikovaResearch Centre for Applied Molecular Oncology (RECAMO), Masaryk Memorial Cancer Institute (MMCI), Zluty Kopec 7, 656 53 Brno, Czech Republic.
Filip Zavadil-KokasResearch Centre for Applied Molecular Oncology (RECAMO), Masaryk Memorial Cancer Institute (MMCI), Zluty Kopec 7, 656 53 Brno, Czech Republic.
Borivoj VojtesekResearch Centre for Applied Molecular Oncology (RECAMO), Masaryk Memorial Cancer Institute (MMCI), Zluty Kopec 7, 656 53 Brno, Czech Republic.ORCID 0000-0001-6194-3705
Masaryk Memorial Cancer Institute · CZUmeå University · SE

Funding

Cancerfonden 180296 and 19 0073 Pj 01 HCancerforskningsfonden Norr LP 21-2270European Regional Development Fund Project ENOCH; CZ.02.1.01/0.0/0.0/16_019/0000868Kempe foundation SMK1864The Czech Science Foundation GACR 19-18177YThe Ministry of Health, Czech Republic Conceptual Development of Research Organization MMCI; 00209805The Wenner-Gren Foundation in Sweden UPD2020-0047
6 · The paper itself

Abstract

DNA and RNA binding proteins (DRBPs) are a broad class of molecules that regulate numerous cellular processes across all living organisms, creating intricate dynamic multilevel networks to control nucleotide metabolism and gene expression. These interactions are highly regulated, and dysregulation contributes to the development of a variety of diseases, including cancer. An increasing number of proteins with DNA and/or RNA binding activities have been identified in recent years, and it is important to understand how their activities are related to the molecular mechanisms of cancer. In addition, many of these proteins have overlapping functions, and it is therefore essential to analyze not only the loss of function of individual factors, but also to group abnormalities into specific types of activities in regard to particular cancer types. In this review, we summarize the classes of DNA-binding, RNA-binding, and DRBPs, drawing particular attention to the similarities and differences between these protein classes. We also perform a cross-search analysis of relevant protein databases, together with our own pipeline, to identify DRBPs involved in cancer. We discuss the most common DRBPs and how they are related to specific cancers, reviewing their biochemical, molecular biological, and cellular properties to highlight their functions and potential as targets for treatment.

Indexed as

NeoplasmsRNA-Binding ProteinsDNADNA-Binding ProteinsHumansRNADNADNA-Binding ProteinsRNARNA-Binding ProteinsbiomarkerscancerDNA/RNA binding proteinmutationtargeted treatment

Identifiers

PMID36012592
PMCPMC9408909
OpenAlexW4292962405

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.