Evidence map›Paper›PMID 36012391›Full record

ArticleInternational journal of molecular sciences2022

RNA-Seq Analysis of UPM-Exposed Epithelium Co-Cultivated with Macrophages and Dendritic Cells in Obstructive Lung Diseases.

Paulina Misiukiewicz-Stępien, Michał Mierzejewski, Elwira Zajusz-Zubek, Krzysztof Goryca, Dorota Adamska, Michał Szeląg, Rafał Krenke, Magdalena Paplińska-Goryca

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Integrative multi-omics identifies CYP1B1 as a candidate molecular link between toxicant exposure and ferroptosis-related epithelial stress in COPD.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Article
  2. Host-pathogen-immune interactions in an air-liquid interface airway model.Frontiers in cellular and infection microbiology · 2026
    Article
  3. Article
  4. Article
  5. The different response of PMRespiratory research · 2025
    Article
  6. Dynamic and prognostic proteomic associations with FEVmedRxiv : the preprint server for health sciences · 2024
    Article
  7. Article
  8. Article
  9. On the path to predicting immune responses in the lung: Modeling the pulmonary innate immune system at the air-liquid interface (ALI).European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Paulina Misiukiewicz-StępienDepartment of Internal Medicine, Pulmonary Diseases and Allergy, Medical University of Warsaw, 02-091 Warsaw, Poland.ORCID 0000-0003-1725-750X
Michał MierzejewskiDepartment of Internal Medicine, Pulmonary Diseases and Allergy, Medical University of Warsaw, 02-091 Warsaw, Poland.
Elwira Zajusz-ZubekDepartment of Air Protection, Faculty of Energy and Environmental Engineering, Silesian University of Technology, 44-100 Gliwice, Poland.ORCID 0000-0001-8817-2058
Krzysztof GorycaGenomic Core Facility, Centre of New Technologies, University of Warsaw, 02-097 Warsaw, Poland.
Dorota AdamskaGenomic Core Facility, Centre of New Technologies, University of Warsaw, 02-097 Warsaw, Poland.ORCID 0000-0001-6223-1021
Michał SzelągGenomic Core Facility, Centre of New Technologies, University of Warsaw, 02-097 Warsaw, Poland.ORCID 0000-0002-3940-0613
Rafał KrenkeDepartment of Internal Medicine, Pulmonary Diseases and Allergy, Medical University of Warsaw, 02-091 Warsaw, Poland.ORCID 0000-0002-0087-2031
Magdalena Paplińska-GorycaDepartment of Internal Medicine, Pulmonary Diseases and Allergy, Medical University of Warsaw, 02-091 Warsaw, Poland.ORCID 0000-0003-0576-7289
Medical University of Warsaw · PLUniversity of Warsaw · PLSilesian University of Technology · PL

Funding

Jakub Potocki Foundation (1WU//5FJP/20)
6 · The paper itself

Abstract

backgroundElevated concentrations of airborne pollutants are correlated with an enlarged rate of obstructive lung disease morbidity as well as acute disease exacerbations. This study aimed to analyze the epithelium mRNA profile in response to airborne particulate matter in the control, asthma, and COPD groups.

resultsA triple co-culture of nasal epithelium, monocyte-derived macrophages, and monocyte-derived dendritic cells obtained from the controls, asthma, and COPD were exposed to urban particulate matter (UPM) for 24 h. RNA-Seq analysis found differences in seven (CYP1B1, CYP1B1-AS1, NCF1, ME1, LINC02029, BPIFA2, EEF1A2), five (CYP1B1, ARC, ENPEP, RASD1, CYP1B1-AS1), and six (CYP1B1, CYP1B1-AS1, IRF4, ATP1B2, TIPARP, CCL22) differentially expressed genes between UPM exposed and unexposed triple co-cultured epithelium in the control, asthma, and COPD groups, respectively. PCR analysis showed that mRNA expression of BPIFA2 and ENPEP was upregulated in both asthma and COPD, while the expression of CYP1B1-AS1 and TIPARP was increased in the epithelium from COPD patients only. Biological processes changed in UPM exposed triple co-cultured epithelium were associated with epidermis development and epidermal cell differentiation in asthma and with response to toxic substances in COPD.

conclusionsThe biochemical processes associated with pathophysiology of asthma and COPD impairs the airway epithelial response to UPM.

Indexed as

AsthmaPulmonary Disease, Chronic ObstructiveDendritic CellsEpitheliumHumansMacrophagesParticulate MatterRNA, MessengerSequence Analysis, RNAParticulate MatterRNA, MessengerasthmaCOPDepitheliumUPMurban particulate matter

Identifiers

PMID36012391
PMCPMC9408857
OpenAlexW4291449211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.