Evidence map›Paper›PMID 36010992›Full record

ArticleCancers2022

How Reliable Are Gene Expression-Based and Immunohistochemical Biomarkers Assessed on a Core-Needle Biopsy? A Study of Paired Core-Needle Biopsies and Surgical Specimens in Early Breast Cancer.

Hani Saghir, Srinivas Veerla, Martin Malmberg, Lisa Rydén, Anna Ehinger, Lao H Saal, Johan Vallon-Christersson, Åke Borg, Cecilia Hegardt, Christer Larsson and 4 more

Registry-linked trialAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02306096 (SCAN-B), which is not on this map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02306096 recruitingnot on this map

SCAN-B: The Sweden Cancerome Analysis Network - Breast Initiative

TypeobservationalSponsorLund UniversityRan2010 to 2031Enrolled20,000ConditionsBreast Neoplasms
3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hani SaghirDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Srinivas VeerlaDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Martin MalmbergDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Lisa RydénDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.ORCID 0000-0001-7515-3130
Anna EhingerDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.ORCID 0000-0001-9225-7396
Lao H SaalDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Johan Vallon-ChristerssonDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Åke BorgDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Cecilia HegardtDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.ORCID 0000-0003-1019-9992
Christer LarssonDivision of Translational Cancer Research, Department of Laboratory Medicine, Lund University, SE-223 81 Lund, Sweden.
Alaa HaidarDepartment of Surgery and Oncology, Hallands Hospital, SE-302 33 Halmstad, Sweden.ORCID 0000-0003-2273-2272
Ingrid HedenfalkDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.ORCID 0000-0002-6840-3397
Niklas LomanDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.
Siker KimbungDivision of Oncology, Department of Clinical Sciences, Lund University, SE-223 81 Lund, Sweden.

Funding

Gunnar Nilsson Cancer Foundation GN-2019-3 and GN-2022-7Mrs Berta Kamprad Foundation FBKS-2018-14, FBKS-2020-9, and FBKS-2022-35
6 · The paper itself

Abstract

In early breast cancer, a preoperative core-needle biopsy (CNB) is vital to confirm the malignancy of suspected lesions and for assessing the expression of treatment predictive and prognostic biomarkers in the tumor to choose the optimal treatments, emphasizing the importance of obtaining reliable results when biomarker status is assessed on a CNB specimen. This study aims to determine the concordance between biomarker status assessed as part of clinical workup on a CNB compared to a medically untreated surgical specimen. Paired CNB and surgical specimens from 259 patients that were part of the SCAN-B cohort were studied. The concordance between immunohistochemical (IHC) and gene expression (GEX) based biomarker status was investigated. Biomarkers of interest included estrogen receptor (ER; specifically, the alpha variant), progesterone receptor (PgR), Ki67, HER2, and tumor molecular subtype. In general, moderate to very good correlation in biomarker status between the paired CNB and surgical specimens was observed for both IHC assessment (83-99% agreement, kappa range 0.474-0.917) and GEX assessment (70-97% agreement, kappa range 0.552-0.800), respectively. However, using IHC, 52% of cases with low Ki67 status in the CNB shifted to high Ki67 status in the surgical specimen (McNemar's

Indexed as

breast cancercore-needle biopsygenomic profilingimmunohistochemistry

Identifiers

PMID36010992
PMCPMC9406531

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.