Evidence map›Paper›PMID 36010952›Full record

ArticleCancers2022

Transcriptomic Profiling Analysis of Castration-Resistant Prostate Cancer Cell Lines Treated with Chronic Intermittent Hypoxia.

Chung Lyul Lee, Minji Lee, Ji Yong Lee, Sin-Hyoung Hong, Seung Woo Yang, Ji-Hyeon Min, Dong-Eon Lee, Joonyoung Baek, Chanseul Kim, Jae Sung Lim and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Chung Lyul LeeDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.ORCID 0000-0002-7157-4883
Minji LeeDepartment of Bio-Analytical Science, University of Science and Technology (UST), Daejeon 34113, Korea.ORCID 0000-0003-1620-2312
Ji Yong LeeDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.
Sin-Hyoung HongDepartment of Bio-Analytical Science, University of Science and Technology (UST), Daejeon 34113, Korea.
Seung Woo YangDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.
Ji-Hyeon MinResearch Center for Bio convergence Analysis, Korea Basic Science Institute (KBSI), Ochang 28119, Korea.
Dong-Eon LeeDepartment of Bio-Analytical Science, University of Science and Technology (UST), Daejeon 34113, Korea.
Joonyoung BaekResearch Center for Bio convergence Analysis, Korea Basic Science Institute (KBSI), Ochang 28119, Korea.
Chanseul KimResearch Center for Bio convergence Analysis, Korea Basic Science Institute (KBSI), Ochang 28119, Korea.
Jae Sung LimDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.
Ki Hak SongDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.
Ju Hyun ShinDepartment of Urology, College of Medicine, Chungnam National University, 266, Munhwa-ro, Jung-gu, Daejeon 35015, Korea.
Gun-Hwa KimDepartment of Bio-Analytical Science, University of Science and Technology (UST), Daejeon 34113, Korea.ORCID 0000-0003-0360-4435
Chungnam National University · KRKorea Basic Science Institute · KRKorea University of Science and Technology · KR

Funding

Korea Basic Science Institute C270300Ministry of Science ICT and Future Planning 2015R1A5A1009024
6 · The paper itself

Abstract

Castration-resistant prostate cancer (CRPC) is still a major concern in men's health, with 375,000 cancer deaths annually. Hypoxia, which is a marked characteristic of advanced solid tumors, has been suggested to induce prostate cancer towards CRPC, metastasis and treatment resistance. To evaluate the effect of hypoxia on prostate cancer, two and five cycles of hypoxia and reoxygenation were administered using 22Rv1 cell lines and denominated as 22Rv1-CI and 22Rv1-PCI, respectively. Cancer cell migration was promoted in 22Rv1-CI compared to controls, and the expression of COL13A1 was significantly up-regulated in 22Rv1-CI according to differentially expressed gene analysis of RNA sequencing among groups. Cancer cell migration was impeded in a wound healing assay after transfecting si-COL13A1. Moreover, the expression of COL13A1 was also higher in the cell line originating from bone metastatic prostate cancer compared to other cell lines. Using the open database GEO, we also confirmed that the expression of COL13A1 was higher in bone metastatic prostate cancer tissue than in localized prostate cancer tissue in patients. Therefore, COL13A1 may be closely related to the bony metastasis of prostate cancer, and our findings may provide valuable information on the pathophysiology of the metastatic niche induced by hypoxia in patients with CRPC.

Indexed as

castration-resistant prostate cancerhypoxiahypoxia-resistant cell linesRNA-seq

Identifiers

PMID36010952
PMCPMC9406188
OpenAlexW4292309534

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.