Evidence map›Paper›PMID 36010295›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Generation of Digital Brain Phantom for Machine Learning Application of Dopamine Transporter Radionuclide Imaging.

Wenyi Shao, Kevin H Leung, Jingyan Xu, Jennifer M Coughlin, Martin G Pomper, Yong Du

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Wenyi ShaoThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0002-9910-5480
Kevin H LeungThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Jingyan XuThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Jennifer M CoughlinThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Martin G PomperThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0001-6753-3010
Yong DuThe Russell H. Morgan Department of Radiology and Radiational Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Johns Hopkins University · US

Funding

Brain phantom generation by generative adversarial net (GAN) for AI-based emission tomographyR03EB030653 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI SHAO, WENYI, XU, JINGYAN · 2021 to 2022
$164k
NIBIB NIH HHS R03 EB030653
6 · The paper itself

Abstract

While machine learning (ML) methods may significantly improve image quality for SPECT imaging for the diagnosis and monitoring of Parkinson's disease (PD), they require a large amount of data for training. It is often difficult to collect a large population of patient data to support the ML research, and the ground truth of lesion is also unknown. This paper leverages a generative adversarial network (GAN) to generate digital brain phantoms for training ML-based PD SPECT algorithms. A total of 594 PET 3D brain models from 155 patients (113 male and 42 female) were reviewed and 1597 2D slices containing the full or a portion of the striatum were selected. Corresponding attenuation maps were also generated based on these images. The data were then used to develop a GAN for generating 2D brain phantoms, where each phantom consisted of a radioactivity image and the corresponding attenuation map. Statistical methods including histogram, Fréchet distance, and structural similarity were used to evaluate the generator based on 10,000 generated phantoms. When the generated phantoms and training dataset were both passed to the discriminator, similar normal distributions were obtained, which indicated the discriminator was unable to distinguish the generated phantoms from the training datasets. The generated digital phantoms can be used for 2D SPECT simulation and serve as the ground truth to develop ML-based reconstruction algorithms. The cumulated experience from this work also laid the foundation for building a 3D GAN for the same application.

Indexed as

deep learninggenerative adversarial network (GAN)phantomSPECT

Identifiers

PMID36010295
PMCPMC9406894
OpenAlexW4291392332

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.