Evidence map›Paper›PMID 36010266›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Identification of

Hong-Yu Shi, Meng-Shi Xie, Chen-Xi Yang, Ri-Tai Huang, Song Xue, Xing-Yuan Liu, Ying-Jia Xu, Yi-Qing Yang

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. NovelBiomedicines · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Identification and Functional Investigation ofDiagnostics (Basel, Switzerland) · 2024
    Article
  6. SomaticExperimental and therapeutic medicine · 2024
    Article
  7. Discovery and functional investigation ofAmerican journal of translational research · 2024
    Article
  8. Discovery ofAmerican journal of translational research · 2024
    Article
  9. Article
  10. Discovery ofBiology · 2023
    Article
  11. Identification ofDiagnostics (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hong-Yu ShiDepartment of Cardiology, Zhongshan Hospital Wusong Branch, Fudan University, Shanghai 200940, China.ORCID 0000-0002-0967-4285
Meng-Shi XieDepartment of Cardiology, Zhongshan Hospital Wusong Branch, Fudan University, Shanghai 200940, China.
Chen-Xi YangDepartment of Cardiology, Shanghai Fifth People's Hospital, Fudan University, Shanghai 200240, China.
Ri-Tai HuangDepartment of Cardiovascular Surgery, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China.
Song XueDepartment of Cardiovascular Surgery, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China.
Xing-Yuan LiuDepartment of Pediatrics, Tongji Hospital, Tongji University School of Medicine, Shanghai 200065, China.
Ying-Jia XuDepartment of Cardiology, Shanghai Fifth People's Hospital, Fudan University, Shanghai 200240, China.
Yi-Qing YangDepartment of Cardiology, Shanghai Fifth People's Hospital, Fudan University, Shanghai 200240, China.ORCID 0000-0003-0291-8395
Fudan University · CNShanghai Jiao Tong University · CNTongji University · CN

Funding

The Basic Research Project of Shanghai, China 20JC1418800The Natural Science Foundation of Shanghai, China 22ZR1446700
6 · The paper itself

Abstract

Congenital heart disease (CHD) is the most frequent kind of birth deformity in human beings and the leading cause of neonatal mortality worldwide. Although genetic etiologies encompassing aneuploidy, copy number variations, and mutations in over 100 genes have been uncovered to be involved in the pathogenesis of CHD, the genetic components predisposing to CHD in most cases remain unclear. We recruited a family with CHD from the Chinese Han population in the present investigation. Through whole-exome sequencing analysis of selected family members, a new SOX18 variation, namely NM_018419.3:c.349A>T; p.(Lys117*), was identified and confirmed to co-segregate with the CHD phenotype in the entire family by Sanger sequencing analysis. The heterozygous variant was absent from the 384 healthy volunteers enlisted as control individuals. Functional exploration via luciferase reporter analysis in cultivated HeLa cells revealed that Lys117*-mutant SOX18 lost transactivation on its target genes NR2F2 and GATA4, two genes responsible for CHD. Moreover, the genetic variation terminated the synergistic activation between SOX18 and NKX2.5, another gene accountable for CHD. The findings strongly indicate SOX18 as a novel gene contributing to CHD, which helps address challenges in the clinical genetic diagnosis and prenatal prophylaxis of CHD.

Indexed as

cardiologycongenital heart diseasegeneticsreporter gene assaytranscription factor

Identifiers

PMID36010266
PMCPMC9406965
OpenAlexW4290705662

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.