Evidence map›Paper›PMID 36009466›Full record

ArticleBiomedicines2022

Polygenic Risk Score Improves Cataract Prediction in East Asian Population.

Chih-Chien Hsu, Hao-Kai Chuang, Yu-Jer Hsiao, Yuan-Chi Teng, Pin-Hsuan Chiang, Yu-Jun Wang, Ting-Yi Lin, Ping-Hsing Tsai, Chang-Chi Weng, Tai-Chi Lin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Chih-Chien HsuSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0003-2354-2999
Hao-Kai ChuangSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0002-5181-9310
Yu-Jer HsiaoSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0002-0783-605X
Yuan-Chi TengDepartment of Medical Research, Taipei Veterans General Hospital, Taipei 112027, Taiwan.
Pin-Hsuan ChiangDepartment of Statistics, Tamkang University, New Taipei 251301, Taiwan.
Yu-Jun WangDepartment of Statistics, Tamkang University, New Taipei 251301, Taiwan.ORCID 0000-0002-5099-9567
Ting-Yi LinDepartment of Medical Research, Taipei Veterans General Hospital, Taipei 112027, Taiwan.ORCID 0000-0001-7906-1612
Ping-Hsing TsaiDepartment of Medical Research, Taipei Veterans General Hospital, Taipei 112027, Taiwan.ORCID 0000-0003-2141-1872
Chang-Chi WengDepartment of Ophthalmology, Taipei Veterans General Hospital, Taipei 112027, Taiwan.ORCID 0000-0003-2178-5612
Tai-Chi LinSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.
De-Kuang HwangSchool of Medicine, National Yang Ming Chiao Tung University, Taipei 112304, Taiwan.ORCID 0000-0001-6346-8485
Ai-Ru HsiehDepartment of Statistics, Tamkang University, New Taipei 251301, Taiwan.ORCID 0000-0003-3900-9101
National Yang Ming Chiao Tung University · TWTaipei Veterans General Hospital · TWTamkang University · TW

Funding

Ministry of Science and Technology in Taiwan MOST 108-2314-B-075-055Taipei Veterans General Hospital V110C-134, V110C-190Yen Tjing Ling Medical Foundation CI-108-21, CI-109-19, CI-110-23
6 · The paper itself

Abstract

Cataracts, characterized by crystalline lens opacities in human eyes, is the leading cause of blindness globally. Due to its multifactorial complexity, the molecular mechanisms remain poorly understood. Larger cohorts of genome-wide association studies (GWAS) are needed to investigate cataracts’ genetic basis. In this study, a GWAS was performed on the largest Han population to date, analyzing a total of 7079 patients and 13,256 controls from the Taiwan Biobank (TWB) 2.0 cohort. Two cataract-associated SNPs with an adjustment of p < 1 × 10−7 in the older groups and nine SNPs with an adjustment of p < 1 × 10−6 in the younger group were identified. Except for the reported AGMO in animal models, most variations, including rs74774546 in GJA1 and rs237885 in OXTR, were not identified before this study. Furthermore, a polygenic risk score (PRS) was created for the young and old populations to identify high-risk cataract individuals, with areas under the receiver operating curve (AUROCs) of 0.829 and 0.785, respectively, after covariate adjustments. Younger individuals had 17.45 times the risk while older people had 10.97 times the risk when comparing individuals in the highest and lowest PRS quantiles. Validation analysis on an independent TWB1.0 cohort revealed AUROCs of 0.744 and 0.659.

Indexed as

Asian populationbiobankcataractgenome-wide association studiespolygenic risk scoreretrospective study

Identifiers

PMID36009466
PMCPMC9406175
OpenAlexW4290705478

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.