Evidence map›Paper›PMID 36008753›Full record

ArticleBMC genomics2022

Revised time estimation of the ancestral human chromosome 2 fusion.

Barbara Poszewiecka, Krzysztof Gogolewski, Paweł Stankiewicz, Anna Gambin

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Genomic-microbial coevolution in human development: chromosome 2 fusion, and human accelerated regions.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Science advances · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Barbara PoszewieckaInstitute of Informatics, Warsaw University, Warsaw, Poland. b.poszewiecka@mimuw.edu.pl.ORCID http://orcid.org/0000-0002-9558-6504
Krzysztof GogolewskiInstitute of Informatics, Warsaw University, Warsaw, Poland.ORCID http://orcid.org/0000-0001-5523-5198
Paweł StankiewiczDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, US.ORCID http://orcid.org/0000-0002-6456-7490
Anna GambinInstitute of Informatics, Warsaw University, Warsaw, Poland.ORCID http://orcid.org/0000-0003-3476-3017
University of Warsaw · PLBaylor College of Medicine · US

Funding

Narodowe Centrum Nauki (PL) 2018/30/M/NZ2/00054Narodowe Centrum Nauki (PL) 2019/33/N/ST6/03110
6 · The paper itself

Abstract

backgroundThe reduction of the chromosome number from 48 in the Great Apes to 46 in modern humans is thought to result from the end-to-end fusion of two ancestral non-human primate chromosomes forming the human chromosome 2 (HSA2). Genomic signatures of this event are the presence of inverted telomeric repeats at the HSA2 fusion site and a block of degenerate satellite sequences that mark the remnants of the ancestral centromere. It has been estimated that this fusion arose up to 4.5 million years ago (Mya).

resultsWe have developed an enhanced algorithm for the detection and efficient counting of the locally over-represented weak-to-strong (AT to GC) substitutions. By analyzing the enrichment of these substitutions around the fusion site of HSA2 we estimated its formation time at 0.9 Mya with a 95% confidence interval of 0.4-1.5 Mya. Additionally, based on the statistics derived from our algorithm, we have reconstructed the evolutionary distances among the Great Apes (Hominoidea).

conclusionsOur results shed light on the HSA2 fusion formation and provide a novel computational alternative for the estimation of the speciation chronology.

Indexed as

Evolution, MolecularHominidaeAnimalsCentromereChromosomes, HumanGenomeHumansBiased gene conversionChromosomal fusionConfidence intervalHuman chromosome 2Inclusion-exclusion principleSpeciation

Identifiers

PMID36008753
PMCPMC9413910
OpenAlexW4293088715

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.