Evidence map›Paper›PMID 36007098›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2022

Interactions in CSF1-Driven Tenosynovial Giant Cell Tumors.

David G P van IJzendoorn, Magdalena Matusiak, Gregory W Charville, Geert Spierenburg, Sushama Varma, Deana R C Colburg, Michiel A J van de Sande, Kirsten van Langevelde, David G Mohler, Kristen N Ganjoo and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Trial
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  7. Article
  8. Article
  9. Case report: Tenosynovial giant cell tumor.Frontiers in oncology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

David G P van IJzendoornDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-2249-5919
Magdalena MatusiakDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-8201-1621
Gregory W CharvilleDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-2774-2704
Geert SpierenburgDepartment of Orthopedic Surgery, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0002-0236-7338
Sushama VarmaDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0001-8137-0641
Deana R C ColburgDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-8287-9455
Michiel A J van de SandeDepartment of Orthopedic Surgery, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0002-9156-7656
Kirsten van LangeveldeDepartment of Radiology, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0002-8871-9081
David G MohlerDepartment of Orthopedic Surgery, Stanford University, Stanford, California.ORCID 0000-0002-8869-139X
Kristen N GanjooDivision of Oncology, Department of Medicine, Stanford University, Stanford, California.ORCID 0000-0003-0452-9967
Nam Q BuiDivision of Oncology, Department of Medicine, Stanford University, Stanford, California.ORCID 0000-0001-6896-4349
Raffi S AvedianDepartment of Orthopedic Surgery, Stanford University, Stanford, California.ORCID 0000-0001-6224-7410
Judith V M G BovéeDepartment of Pathology, Leiden University Medical Center, Leiden, the Netherlands.ORCID 0000-0003-1155-0481
Robert SteffnerDepartment of Orthopedic Surgery, Stanford University, Stanford, California.ORCID 0000-0003-0405-9520
Robert B WestDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-8330-8283
Matt van de RijnDepartment of Pathology, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-1909-9739
Stanford Medicine · USLeiden University Medical Center · NLStanford University · US

Funding

Ultra high throughput sequencer for sustaining and enhancing multi-scale genomic studiesS10OD025212 · OD · STANFORD UNIVERSITY · PI SNYDER, MICHAEL P. · 2018 to 2018
$600k
Computer ClusterS10OD021763 · OD · STANFORD UNIVERSITY · PI JI, HANLEE P · 2016 to 2016
$481k
NIH HHS S10 OD021763NIH HHS S10 OD025212
6 · The paper itself

Abstract

purposeA major component of cells in tenosynovial giant cell tumor (TGCT) consists of bystander macrophages responding to CSF1 that is overproduced by a small number of neoplastic cells with a chromosomal translocation involving the CSF1 gene. An autocrine loop was postulated where the neoplastic cells would be stimulated through CSF1R expressed on their surface. Here, we use single-cell RNA sequencing (scRNA-seq) to investigate cellular interactions in TGCT. EXPERIMENTAL

designA total of 18,788 single cells from three TGCT and two giant cell tumor of bone (GCTB) samples underwent scRNA-seq. The three TGCTs were additionally analyzed using long-read RNA sequencing. Immunofluorescence and IHC for a range of markers were used to validate and extend the scRNA-seq findings.

resultsTwo recurrent neoplastic cell populations were identified in TGCT that are highly similar to nonneoplastic synoviocytes. We identified GFPT2 as a marker that highlights the neoplastic cells in TCGT. We show that the neoplastic cells themselves do not express CSF1R. We identified overlapping MAB features between the giant cells in TGCT and GCTB.

conclusionsThe neoplastic cells in TGCT are highly similar to nonneoplastic synoviocytes. The lack of CSF1R on the neoplastic cells indicates they may be unaffected by current therapies. High expression of GFPT2 in the neoplastic cells is associated with activation of the YAP1/TAZ pathway. In addition, we identified expression of the platelet-derived growth factor receptor in the neoplastic cells. These findings suggest two additional pathways to target in this tumor.

Indexed as

Giant Cell Tumor of Tendon SheathHumansTranslocation, Genetic

Identifiers

PMID36007098
PMCPMC9660542
OpenAlexW4293253819

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.