Evidence map›Paper›PMID 36005881›Full record

ArticleGenetics2022

A reciprocal translocation involving Aspergillus nidulans snxAHrb1/Gbp2 and gyfA uncovers a new regulator of the G2-M transition and reveals a role in transcriptional repression for the setBSet2 histone H3-lysine-36 methyltransferase.

Steven W James, Jonathan Palmer, Nancy P Keller, Morgan L Brown, Matthew R Dunworth, Sarah G Francisco, Katherine G Watson, Breanna Titchen, Alecia Achimovich, Andrew Mahoney and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 12 institutions in 1 country.

Steven W JamesDepartment of Biology, Gettysburg College, Gettysburg, PA 17325, USA.ORCID 0000-0003-1984-6017
Jonathan PalmerData Analytics, Genencor Technology Center, IFF, Palo Alto, CA, 94306, USA.ORCID 0000-0003-0929-3658
Nancy P KellerDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI 53726, USA.ORCID 0000-0002-4386-9473
Morgan L BrownDepartment of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-8569-7913
Matthew R DunworthDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21218, USA.ORCID 0000-0002-8852-169X
Sarah G FranciscoDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0001-9794-1533
Katherine G WatsonSchool of Medicine, Noorda College of Osteopathic Medicine, Provo, UT 84606, USA.
Breanna TitchenDepartment of Biological and Biomedical Sciences, Harvard University, Cambridge, MA 02138, USA.ORCID 0000-0002-1569-0513
Alecia AchimovichDepartment of Chemistry, Gettysburg College, Gettysburg, PA 17325, USA.
Andrew MahoneyDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA.ORCID 0000-0003-4142-6908
Joseph P ArtemiouSchool of Nursing, Columbia University, New York, NY 10032, USA.
Kyra G BuettnerSchool of Medicine, Thomas Jefferson University, Philadelphia, PA 19144, USA.
Madelyn ClassSchool of Medicine, Temple University, Philadelphia, PA 19140, USA.
Andrew L SydenstrickerNYC Urban Field Station, US Forest Service, Bayside, NY 11359, USA.
Sarah Lea AnglinDepartment of Biology, Millsaps College, Jackson, MS 39210, USA.ORCID 0000-0003-0864-2561
Gettysburg College · USBoston Children's Hospital · USColumbia University · USEmory University · USHarvard University · USJohns Hopkins University · USMillsaps College · USTemple University · USThomas Jefferson University · USUniversity of Pennsylvania · USUniversity of Wisconsin–Madison · USUS Forest Service · US

Funding

TOUGALOO PROTEOMICSP20RR016476 · NCRR · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI KRAMER, WOLFGANG · 2001 to 2011
$30.4M
Comprehensive analysis of NRPS-derived metabolomes of three Aspergillus speciesR01GM112739 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KELLER, NANCY P · 2015 to 2023
$2.8M
GENERATION OF SUPPRESSORS OF NIMX CDC2 MUTATIONSR15GM055885 · NIGMS · MILLSAPS COLLEGE · PI MCGUIRE, SARAH LEA · 1997 to 2003
$273k
NCRR NIH HHS P20 RR016476NIGMS NIH HHS R01 GM112739NIGMS NIH HHS R15 GM055885NIH HHS R15GM055885
6 · The paper itself

Abstract

Aspergillus nidulans snxA, an ortholog of Saccharomyces cerevisiae Hrb1/Gbp2 messenger RNA shuttle proteins, is-in contrast to budding yeast-involved in cell cycle regulation, in which snxA1 and snxA2 mutations as well as a snxA deletion specifically suppress the heat sensitivity of mutations in regulators of the CDK1 mitotic induction pathway. snxA mutations are strongly cold sensitive, and at permissive temperature snxA mRNA and protein expression are strongly repressed. Initial attempts to identify the causative snxA mutations revealed no defects in the SNXA protein. Here, we show that snxA1/A2 mutations resulted from an identical chromosome I-II reciprocal translocation with breakpoints in the snxA first intron and the fourth exon of a GYF-domain gene, gyfA. Surprisingly, a gyfA deletion and a reconstructed gyfA translocation allele suppressed the heat sensitivity of CDK1 pathway mutants in a snxA+ background, demonstrating that 2 unrelated genes, snxA and gyfA, act through the CDK1-CyclinB axis to restrain the G2-M transition, and for the first time identifying a role in G2-M regulation for a GYF-domain protein. To better understand snxA1/A2-reduced expression, we generated suppressors of snxA cold sensitivity in 2 genes: (1) loss of the abundant nucleolar protein Nsr1/nucleolin bypassed the requirement for snxA and (2) loss of the Set2 histone H3 lysine36 (H3K36) methyltransferase or a nonmethylatable histone H3K36L mutant rescued hypomorphic snxA mutants by restoring full transcriptional proficiency, indicating that methylation of H3K36 acts normally to repress snxA transcription. These observations are in line with known Set2 functions in preventing excessive and cryptic transcription of active genes.

Indexed as

Aspergillus nidulansSaccharomyces cerevisiae ProteinsGene Expression Regulation, FungalHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesLysineRNA, MessengerTranscription, GeneticHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesLysineRNA, MessengerSaccharomyces cerevisiae ProteinscclABre2gyfAGYF domainH3K36me3H3K4me3nsr1/nucleolinnsrAsetBsnxAHrb1/Gbp2translocation

Identifiers

PMID36005881
PMCPMC9526064
OpenAlexW4293051988

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.