Evidence map›Paper›PMID 36005688›Full record

ArticleMembranes2022

ReSMAP: Web Server for Predicting Residue-Specific Membrane-Association Propensities of Intrinsically Disordered Proteins.

Sanbo Qin, Alan Hicks, Souvik Dey, Ramesh Prasad, Huan-Xiang Zhou

Abstract read
In one paragraph

Article in Membranes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. A membrane insertion code for intrinsically disordered proteins.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Journal of the American Chemical Society · 2025
    Article
  5. bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sanbo QinDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.
Alan HicksDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.
Souvik DeyDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.ORCID 0000-0002-4366-5681
Ramesh PrasadDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.
Huan-Xiang ZhouDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.ORCID 0000-0001-9020-0302

Funding

Quantitative, Mechanistic Studies of Biomolecular RecognitionR35GM118091 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Huan-Xiang Zhou · 2016 to 2026
$6.5M
Membrane Protein Structures and Interactions in the M. tuberculosis DivisomeR01AI119178 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 2015 to 2019
$3.6M
NIAID NIH HHS R01 AI119178NIGMS NIH HHS R35 GM118091NIH HHS AI119178NIH HHS GM118091
6 · The paper itself

Abstract

The functional processes of many proteins involve the association of their intrinsically disordered regions (IDRs) with acidic membranes. We have identified the membrane-association characteristics of IDRs using extensive molecular dynamics (MD) simulations and validated them with NMR spectroscopy. These studies have led to not only deep insight into functional mechanisms of IDRs but also to intimate knowledge regarding the sequence determinants of membrane-association propensities. Here we turned this knowledge into a web server called ReSMAP, for predicting the residue-specific membrane-association propensities from IDR sequences. The membrane-association propensities are calculated from a sequence-based partition function, trained on the MD simulation results of seven IDRs. Robustness of the prediction is demonstrated by leaving one IDR out of the training set. We anticipate there will be many applications for the ReSMAP web server, including rapid screening of IDR sequences for membrane association.

Indexed as

amphipathic helixintrinsically disordered proteinsintrinsically disordered regionsmembrane-association propensitymembrane binding

Identifiers

PMID36005688
PMCPMC9416665

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.