Evidence map›Paper›PMID 36003817›Full record

ArticleFrontiers in plant science2022

Genome sequencing of adapted diploid potato clones.

Sai Reddy Achakkagari, Maria Kyriakidou, Kyle M Gardner, David De Koeyer, Hielke De Jong, Martina V Strömvik, Helen H Tai

Abstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Jan and mini-Jan, a model system for potato functional genomics.bioRxiv : the preprint server for biology · 2024
    Article
  6. Diploid inbred-based hybrids: fast-forward breeding approach in potatoes.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  7. Article
  8. Pangenome analyses reveal impact of transposable elements and ploidy on the evolution of potato species.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sai Reddy AchakkagariDepartment of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC, Canada.
Maria KyriakidouDepartment of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC, Canada.
Kyle M GardnerFredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada.
David De KoeyerFredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada.
Hielke De JongFredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada.
Martina V StrömvikDepartment of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC, Canada.
Helen H TaiFredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cultivated potato is a vegetatively propagated crop, and most varieties are autotetraploid with high levels of heterozygosity. Reducing the ploidy and breeding potato at the diploid level can increase efficiency for genetic improvement including greater ease of introgression of diploid wild relatives and more efficient use of genomics and markers in selection. More recently, selfing of diploids for generation of inbred lines for F1 hybrid breeding has had a lot of attention in potato. The current study provides genomics resources for nine legacy non-inbred adapted diploid potato clones developed at Agriculture and Agri-Food Canada.

Indexed as

breedingdeleterious allelesdiploid potatogenome sequencingpotatoStCDF1

Identifiers

PMID36003817
PMCPMC9394749

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.