Evidence map›Paper›PMID 36003592›Full record

ArticleCurrent research in insect science2021

Streamlined phage display library protocols for identification of insect gut binding peptides highlight peptide specificity.

Ruchir Mishra, Ya Guo, Pavan Kumar, Pablo Emiliano Cantón, Clebson S Tavares, Rahul Banerjee, Suyog Kuwar, Bryony C Bonning

Open access · goldAbstract read
In one paragraph

Article in Current research in insect science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Cry1Ba1-mediated toxicity of transgenicFrontiers in insect science · 2023
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ruchir MishraDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Ya GuoDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Pavan KumarDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Pablo Emiliano CantónDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Clebson S TavaresDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Rahul BanerjeeDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Suyog KuwarDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
Bryony C BonningDepartment of Entomology and Nematology, University of Florida, PO Box 110620, Gainesville, FL 32611, USA.
University of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phage display libraries have been used to isolate insect gut binding peptides for use as pathogen transmission blocking agents, and to provide artificial anchors for increased toxicity of bacteria-derived pesticidal proteins. Previously, phage clones displaying enriched peptides were sequenced by Sanger sequencing. Here we present a streamlined protocol for identification of insect gut binding peptides, using insect-appropriate feeding strategies, with next generation sequencing and tailored bioinformatics analyses. The bioinformatics pipeline is designed to eliminate poorly enriched and false positive peptides, and to identify peptides predicted to be stable and hydrophilic. In addition to developing streamlined protocols, we also sought to address whether candidate gut binding peptides can bind to insects from more than one order, which is an important consideration for safe, practical use of peptide-modified pesticidal proteins. To this end, we screened phage display libraries for peptides that bind to the gut epithelia of two pest insects, the Asian citrus psyllid,

Indexed as

BioinformaticsGut binding peptideHoney beeInsect pestPhage display library

Identifiers

PMID36003592
PMCPMC9387513
OpenAlexW3131640267

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.