Evidence map›Paper›PMID 36003396›Full record

ReviewFrontiers in immunology2022

Roles and functions of SARS-CoV-2 proteins in host immune evasion.

Farooq Rashid, Zhixun Xie, Muhammad Suleman, Abdullah Shah, Suliman Khan, Sisi Luo

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 134 citations in OpenAlex.

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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Farooq RashidDivision of Infectious Diseases, Chongqing Public Health Medical Center, Chongqing, China.
Zhixun XieDepartment of Biotechnology, Guangxi Veterinary Research Institute, Nanning, China.
Muhammad SulemanCenter for Biotechnology and Microbiology, University of Swat, Swat, Pakistan.
Abdullah ShahDepartment of Biotechnology, Shaheed Benazir Bhutto University, Sheringal, Pakistan.
Suliman KhanDepartment of Medical Lab Technology, The University of Haripur, Haripur, Pakistan.
Sisi LuoDepartment of Biotechnology, Guangxi Veterinary Research Institute, Nanning, China.
Guangxi Veterinary Research Institute · CNChongqing Public Health Medical Center · CNShaheed Benazir Bhutto University · PKUniversity of Haripur · PKUniversity of Swat · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) evades the host immune system through a variety of regulatory mechanisms. The genome of SARS-CoV-2 encodes 16 non-structural proteins (NSPs), four structural proteins, and nine accessory proteins that play indispensable roles to suppress the production and signaling of type I and III interferons (IFNs). In this review, we discussed the functions and the underlying mechanisms of different proteins of SARS-CoV-2 that evade the host immune system by suppressing the IFN-β production and TANK-binding kinase 1 (TBK1)/interferon regulatory factor 3 (IRF3)/signal transducer and activator of transcription (STAT)1 and STAT2 phosphorylation. We also described different viral proteins inhibiting the nuclear translocation of IRF3, nuclear factor-κB (NF-κB), and STATs. To date, the following proteins of SARS-CoV-2 including NSP1, NSP6, NSP8, NSP12, NSP13, NSP14, NSP15, open reading frame (ORF)3a, ORF6, ORF8, ORF9b, ORF10, and Membrane (M) protein have been well studied. However, the detailed mechanisms of immune evasion by NSP5, ORF3b, ORF9c, and Nucleocapsid (N) proteins are not well elucidated. Additionally, we also elaborated the perspectives of SARS-CoV-2 proteins.

Indexed as

COVID-19SARS-CoV-2HumansImmune EvasionInterferonsViral ProteinsInterferonsViral Proteinsaccessory proteinsimmune evasionnon-structural proteinsSARS-CoV-2structural proteins

Identifiers

PMID36003396
PMCPMC9394213
OpenAlexW4290647892

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.