Evidence map›Paper›PMID 36003152›Full record

ArticleFrontiers in cell and developmental biology2022

A One-step strategy to target essential factors with auxin-inducible degron system in mouse embryonic stem cells.

Jingsheng Li, Chunhong Dai, Wenyan Xie, Heyao Zhang, Xin Huang, Constantinos Chronis, Ying Ye, Wensheng Zhang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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  6. Auxin alone provokes retention ofmicroPublication biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jingsheng LiCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Chunhong DaiCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Wenyan XieCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Heyao ZhangCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Xin HuangDepartment of Computational Biology St. Jude Children's Research Hospital, Memphis, TN, United States.
Constantinos ChronisDepartment of Biochemistry and Molecular Genetics University of Illinois at Chicago, Chicago, IL, United States.
Ying YeCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Wensheng ZhangCam-Su Genomic Resource Center, Medical College of Soochow University, Suzhou, China.
Soochow University · CNBinzhou Medical University · CNSt. Jude Children's Research Hospital · USUniversity of Illinois Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The self-renewal and pluripotency of embryonic stem cells (ESCs) are conferred by networks including transcription factors and histone modifiers. The Auxin-inducible degron (AID) system can rapidly and reversibly degrade its target proteins and is becoming a powerful tool to explore novel function of key pluripotent and histone modifier genes in ESCs. However, the low biallelic tagging efficiency and a basal degradation level of the current AID systems deem it unsuitable to target key pluripotent genes with tightly controlled expression levels. Here, we develop a one-step strategy to successfully target and repress the endogenous pluripotent genes in mouse ESCs and replace their expression with AID fused transgenes. Therefore, this work provides an efficient way for employing the AID system to uncover novel function of essential pluripotent and chromatin modifier genes in ESCs.

Indexed as

auxin-inducible degronchromatin modifiersdifferentiationembryonic stem cellspluripotency

Identifiers

PMID36003152
PMCPMC9393215
OpenAlexW4290565904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.