Evidence map›Paper›PMID 36001207›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2022

Metagenomic next-generation sequencing restores the diagnosis of a rare infectious complication of B cell depletion.

Margaux Garzaro, Lin-Pierre Zhao, Nathalie De Castro, Séverine Mercier-Delarue, Francois Camelena, Sabine Pereyre, Marie Gardette, Béatrice Berçot, Marion Malphettes, Cécile Bébéar and 4 more

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In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Unmasking Bartonella henselae infection in the shadows of long COVID thanks to clinical metagenomics.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  3. Article
  4. Journal of bone and joint infection · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Margaux GarzaroDepartment of Clinical Immunopathology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, 1, Avenue Claude Vellefaux, 75010, Paris, France. margaux.garzaro@aphp.fr.
Lin-Pierre ZhaoDepartment of Clinical Immunopathology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, 1, Avenue Claude Vellefaux, 75010, Paris, France.
Nathalie De CastroDepartment of Infectious Diseases, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France.
Séverine Mercier-DelarueDepartment of Microbiology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France.
Francois CamelenaDepartment of Microbiology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France.
Sabine PereyreBacteriology Department, French National Center for Bacterial Sexually Transmitted Infections, CHU Bordeaux, and USC, University Bordeaux, 3671, Bordeaux, EA, France.
Marie GardetteBacteriology Department, French National Center for Bacterial Sexually Transmitted Infections, CHU Bordeaux, and USC, University Bordeaux, 3671, Bordeaux, EA, France.
Béatrice BerçotDepartment of Microbiology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France.
Marion MalphettesDepartment of Clinical Immunopathology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, 1, Avenue Claude Vellefaux, 75010, Paris, France.
Cécile BébéarBacteriology Department, French National Center for Bacterial Sexually Transmitted Infections, CHU Bordeaux, and USC, University Bordeaux, 3671, Bordeaux, EA, France.
Jean-David BouazizUniversité de Paris, Paris, France.
Jérôme Le GoffDepartment of Microbiology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France.
Lionel GalicierDepartment of Clinical Immunopathology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, 1, Avenue Claude Vellefaux, 75010, Paris, France.
Maud SalmonaDepartment of Microbiology, Hôpital Saint-Louis, Assistance Publique Hôpitaux de Paris, Paris, France. maud.salmona@aphp.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A 45-year-old female patient receiving rituximab for B cell non-Hodgkin follicular lymphoma presented unexplained recurrent fever, abdominal discomfort, and pollakiuria. We performed shotgun metagenomic sequencing from peri-kidney collection that identified a co-infection with Mycoplasma hominis and Ureaplasma urealyticum. The patient recovered with sequelae after appropriate antibiotic treatment was given.

Indexed as

Mycoplasma InfectionsUreaplasma InfectionsAnti-Bacterial AgentsFemaleHigh-Throughput Nucleotide SequencingHumansMiddle AgedMycoplasma hominisRituximabUreaplasmaUreaplasma urealyticumAnti-Bacterial AgentsRituximabB cell aplasiaMetagenomic next-generation sequencingMycoplasma hominis

Identifiers

PMID36001207

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.