Evidence map›Paper›PMID 35997919›Full record

ArticlePlant molecular biology2022

Functional characterization of two WD40 family proteins, Alr0671 and All2352, from Anabaena PCC 7120 and deciphering their role in abiotic stress management.

Krishna Kumar Rai, Shilpi Singh, Ruchi Rai, L C Rai

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Article in Plant molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Krishna Kumar RaiMolecular Biology Section, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, 221005, Varanasi, India.
Shilpi SinghMolecular Biology Section, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, 221005, Varanasi, India.
Ruchi RaiMolecular Biology Section, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, 221005, Varanasi, India.
L C RaiMolecular Biology Section, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, 221005, Varanasi, India. lcrbhu15@gmail.com.ORCID http://orcid.org/0000-0003-2458-4867
Banaras Hindu University · IN

Funding

National Bureau of Agriculturally Important Microorganisms NBAIM/AMAAS/2017-20/PF/10
6 · The paper itself

Abstract

WD40 domain-containing proteins are one of the eukaryotes' most ancient and ubiquitous protein families. Little is known about the presence and function of these proteins in cyanobacteria in general and Anabaena in particular. In silico analysis confirmed the presence of WD40 repeats. Gene expression analysis indicated that the transcript levels of both the target proteins were up-regulated up to 4 fold in Cd and drought and 2-3 fold in heat, salt, and UV-B stress. Using a fluorescent oxidative stress indicator, we showed that the recombinant proteins were scavenging reactive oxygen species (ROS) (4-5 fold) more efficiently than empty vectors. Chromatin immunoprecipitation analysis (ChIP) and electrophoretic mobility shift assay (EMSA) revealed that the target proteins function as transcription factors after binding to the promoter sequences. The presence of kinase activity (2-4 fold) in the selected proteins indicated that these proteins could modulate the functions of other cellular proteins under stress conditions by inducing phosphorylation of specific amino acids. The chosen proteins also demonstrated interaction with Zn, Cd, and Cu (1.4-2.5 fold), which might stabilize the proteins' structure and biophysical functions under multiple abiotic stresses. The functionally characterized Alr0671 and All2352 proteins act as transcription factors and offer tolerance to agriculturally relevant abiotic stresses.

Indexed as

AnabaenaCadmiumDroughtsPlant ProteinsStress, PhysiologicalTranscription FactorsCadmiumPlant ProteinsTranscription FactorsAbiotic stress toleranceAnabaenaChIPEMSAPromoter analysisWD40 proteins

Identifiers

PMID35997919
OpenAlexW4292756603

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.