Evidence map›Paper›PMID 35996015›Full record

ArticleJournal of human genetics2022

Integrated analysis of probability of type 2 diabetes mellitus with polymorphisms and methylation of SLC30A8 gene: a nested case-control study.

Fulan Hu, Yanyan Zhang, Pei Qin, Yang Zhao, Dechen Liu, Qionggui Zhou, Gang Tian, Quanman Li, Chunmei Guo, Xiaoyan Wu and 6 more

Abstract read
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In one paragraph

Article in Journal of human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Fulan HuSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.
Yanyan ZhangSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.
Pei QinSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.
Yang ZhaoDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Dechen LiuDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Qionggui ZhouDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Gang TianDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Quanman LiDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Chunmei GuoDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Xiaoyan WuSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.
Ranran QieDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Shengbing HuangDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Minghui HanDepartment of Epidemiology and Health Statistics, School of Public Health, Zhengzhou University, Zhengzhou, Henan, People's Republic of China.
Yang LiSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.
Dongsheng HuSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China.ORCID http://orcid.org/0000-0002-9998-8041
Ming ZhangSchool of Public Health, Shenzhen University Health Science Center, Shenzhen, Guangdong, People's Republic of China. zhangming@szu.edu.cn.ORCID http://orcid.org/0000-0002-2923-5335
Zhengzhou University · CNShenzhen University Health Science Center · CN

Funding

Guangdong Medical Research Foundation (Guangdong Province Medical Research Foundation) grant no. A2017181National Natural Science Foundation of China (National Science Foundation of China) grant nos. 81373074, 81402752, and 81673260Natural Science Foundation of Guangdong Province (Guangdong Natural Science Foundation) grant no. 2017A030313452
6 · The paper itself

Abstract

To estimate the associations between single-nucleotide polymorphisms (SNPs) and methylation of SLC30A8 gene and T2DM risk, and the interactions among SNPs, methylation, and environmental factors on T2DM risk. We genotyped 9 SNPs and tested methylation at 46 CpG loci of SLC30A8 in the baseline DNA of 290 T2DM cases and 290 matched controls nested in the Rural Chinese Cohort Study. A conditional logistic regression model was used to estimate the associations between SNPs and SLC30A8 methylation and T2DM risk. Multifactor Dimensionality Reduction analysis was used to estimate the effect of interactions among SNPs, methylation, and environment on T2DM risk. Probability of T2DM was decreased with rs11558471 (GG vs. AA, OR = 0.55, 95% CI 0.32, 0.96), with rs13266634 (TT vs. CC, OR = 0.55, 95% CI 0.32, 0.94), with rs3802177 (AA vs. GG, OR = 0.54, 95%CI 0.31, 0.94), and its probability was increased with rs2466293 of SLC30A8 (GA vs. AA, OR = 1.63, 95% CI 1.08-2.47). Its probability was also significantly associated with methylation of CG9 and CG45 (OR = 0.56 [95% CI 0.33-0.97] and 1.61 [95%CI 1.03--2.51]). T2DM probability was significantly associated with the interaction effect between rs2466293 and hypertension (p = 0.045). T2DM probability was also significantly associated with the combination effects of rs2466293 with BMI, hypertension, and hypertriglyceridemia, with the combination effects of hypertriglyceridemia with rs11558471, rs13266634, and methylation of CG45.

Indexed as

Diabetes Mellitus, Type 2HypertensionHypertriglyceridemiaCase-Control StudiesChinaCohort StudiesGenetic Predisposition to DiseaseGenotypeHumansMethylationPolymorphism, Single NucleotideProbabilityZinc Transporter 8SLC30A8 protein, humanZinc Transporter 8

Identifiers

PMID35996015
OpenAlexW4292567087

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.