Evidence map›Paper›PMID 35995792›Full record

ArticleNature communications2022

Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering.

Chen Ling, George L Peabody, Davinia Salvachúa, Young-Mo Kim, Colin M Kneucker, Christopher H Calvey, Michela A Monninger, Nathalie Munoz Munoz, Brenton C Poirier, Kelsey J Ramirez and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  7. Article
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  11. Multi-strain analysis ofmSystems · 2026
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  12. Engineering mixed sugar metabolic channels inSynthetic and systems biotechnology · 2026
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  13. Multi-strain Analysis ofbioRxiv : the preprint server for biology · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Efficient Synthesis ofMolecules (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Chen LingRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID 0000-0003-1760-9544
George L PeabodyAgile BioFoundry, Emeryville, CA, 94608, USA.
Davinia SalvachúaRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Young-Mo KimAgile BioFoundry, Emeryville, CA, 94608, USA.ORCID 0000-0002-8972-7593
Colin M KneuckerRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Christopher H CalveyRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID 0000-0002-7330-4983
Michela A MonningerRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Nathalie Munoz MunozAgile BioFoundry, Emeryville, CA, 94608, USA.ORCID 0000-0002-2723-3512
Brenton C PoirierAgile BioFoundry, Emeryville, CA, 94608, USA.
Kelsey J RamirezRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID 0000-0002-5114-742X
Peter C St JohnRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID 0000-0002-7928-3722
Sean P WoodworthRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID 0000-0003-3792-9553
Jon K MagnusonAgile BioFoundry, Emeryville, CA, 94608, USA.ORCID 0000-0001-7712-7024
Kristin E Burnum-JohnsonAgile BioFoundry, Emeryville, CA, 94608, USA.ORCID 0000-0002-2722-4149
Adam M GussAgile BioFoundry, Emeryville, CA, 94608, USA. gussam@ornl.gov.ORCID 0000-0001-5823-5329
Christopher W JohnsonRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. christopher.johnson@nrel.gov.ORCID 0000-0002-2979-4751
Gregg T BeckhamRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. gregg.beckham@nrel.gov.ORCID 0000-0002-3480-212X
National Laboratory of the Rockies · USPacific Northwest National Laboratory · USOak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Muconic acid is a bioprivileged molecule that can be converted into direct replacement chemicals for incumbent petrochemicals and performance-advantaged bioproducts. In this study, Pseudomonas putida KT2440 is engineered to convert glucose and xylose, the primary carbohydrates in lignocellulosic hydrolysates, to muconic acid using a model-guided strategy to maximize the theoretical yield. Using adaptive laboratory evolution (ALE) and metabolic engineering in a strain engineered to express the D-xylose isomerase pathway, we demonstrate that mutations in the heterologous D-xylose:H

Indexed as

Pseudomonas putidaXyloseFermentationGlucoseMetabolic EngineeringSorbic AcidGlucosemuconic acidSorbic AcidXylose

Identifiers

PMID35995792
PMCPMC9395534
OpenAlexW4292608433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.