Evidence map›Paper›PMID 35993730›Full record

ArticleMicrobiology spectrum2022

Exploring the Bacteriome and Resistome of Humans and Food-Producing Animals in Brazil.

Fabíola Marques de Carvalho, Tiago Barcelos Valiatti, Fernanda Fernandes Santos, Alessandro Conrado de Oliveira Silveira, Ana Paula C Guimarães, Alexandra Lehmkuhl Gerber, Cintya de Oliveira Souza, Dandara Cassu Corsi, Danielle Murici Brasiliense, Débora de Souza Collares Maia Castelo-Branco and 18 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Clonal dissemination of highly virulentOne health (Amsterdam, Netherlands) · 2023
    Article
  6. Genomic Analysis ofAntibiotics (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 8 institutions in 1 country.

Fabíola Marques de Carvalho *Bioinformatics Laboratory, National Laboratory of Scientific Computing (LNCC), Rio de Janeiro, Rio de Janeiro, Brazil.
Tiago Barcelos Valiatti *Universidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Fernanda Fernandes SantosUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Alessandro Conrado de Oliveira SilveiraRegional University of Blumenau (FURB), Blumenau, Santa Catarina, Brazil.
Ana Paula C GuimarãesBioinformatics Laboratory, National Laboratory of Scientific Computing (LNCC), Rio de Janeiro, Rio de Janeiro, Brazil.
Alexandra Lehmkuhl GerberBioinformatics Laboratory, National Laboratory of Scientific Computing (LNCC), Rio de Janeiro, Rio de Janeiro, Brazil.
Cintya de Oliveira SouzaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Secretaria de Vigilância em Saúde (SVS), Ministério da Saúde, Ananindeua, Pará, Brazil.
Dandara Cassu CorsiUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Danielle Murici BrasilienseSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Secretaria de Vigilância em Saúde (SVS), Ministério da Saúde, Ananindeua, Pará, Brazil.
Débora de Souza Collares Maia Castelo-BrancoPostgraduate Program in Medical Microbiology, Group of Applied Medical Microbiology, Federal University of Ceará (UFC), Fortaleza, Ceará, Brazil.
Eleine Kuroki AnzaiRegional University of Blumenau (FURB), Blumenau, Santa Catarina, Brazil.
Francisco Ozório Bessa-NetoUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Glaucia Morgana de Melo GuedesPostgraduate Program in Medical Microbiology, Group of Applied Medical Microbiology, Federal University of Ceará (UFC), Fortaleza, Ceará, Brazil.
Gleyce Hellen de Almeida de SouzaUniversidade Federal da Grande Douradosgrid.412335.2 (UFGD), Laboratório de Pesquisa em Ciências da Saúde, Dourados, Mato Grosso do Sul, Brazil.
Leandro Nascimento LemosBioinformatics Laboratory, National Laboratory of Scientific Computing (LNCC), Rio de Janeiro, Rio de Janeiro, Brazil.
Lúcio Fábio Caldas FerrazLaboratory of Molecular Biology of Microorganisms, University São Francisco (USF), Bragança Paulista, São Paulo, Brazil.
Márcia de Nazaré Miranda BahiaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Secretaria de Vigilância em Saúde (SVS), Ministério da Saúde, Ananindeua, Pará, Brazil.
Márcia Soares Mattos VazUniversidade Federal da Grande Douradosgrid.412335.2 (UFGD), Laboratório de Pesquisa em Ciências da Saúde, Dourados, Mato Grosso do Sul, Brazil.
Ramon Giovani Brandão da SilvaUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Ruanita VeigaUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Simone SimionattoUniversidade Federal da Grande Douradosgrid.412335.2 (UFGD), Laboratório de Pesquisa em Ciências da Saúde, Dourados, Mato Grosso do Sul, Brazil.
Walter Aparecido Pimentel MonteiroLaboratory of Molecular Biology of Microorganisms, University São Francisco (USF), Bragança Paulista, São Paulo, Brazil.
William Alencar de Oliveira LimaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Secretaria de Vigilância em Saúde (SVS), Ministério da Saúde, Ananindeua, Pará, Brazil.
Carlos Roberto Veiga KifferUniversidade Federal de São Paulo (UNIFESP), Laboratório Especial de Microbiologia Clínica (LEMC), Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Antonio Carlos Campos PignatariUniversidade Federal de São Paulo (UNIFESP), Laboratório Especial de Microbiologia Clínica (LEMC), Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Rodrigo CayôUniversidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.
Ana Tereza Ribeiro de Vasconcelos *Bioinformatics Laboratory, National Laboratory of Scientific Computing (LNCC), Rio de Janeiro, Rio de Janeiro, Brazil.ORCID 0000-0002-4632-2086
Ana Cristina Gales *Universidade Federal de São Paulo (UNIFESP), Laboratório Alerta, Division of Infectious Diseases, Department of Internal Medicine, Escola Paulista de Medicina (EPM), São Paulo, São Paulo, Brazil.ORCID 0000-0003-0913-768X
Universidade Federal de São Paulo · BRLaboratório Nacional de Computação Científica · BRMinistério da Saúde · BRInstituto de Ciências Farmacêuticas · BRUniversidade Federal da Grande Dourados · BRUniversidade Federal do Ceará · BRUniversidade Regional de Blumenau · BRUniversidade São Francisco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The epidemiology of antimicrobial resistance (AMR) is complex, with multiple interfaces (human-animal-environment). In this context, One Health surveillance is essential for understanding the distribution of microorganisms and antimicrobial resistance genes (ARGs). This report describes a multicentric study undertaken to evaluate the bacterial communities and resistomes of food-producing animals (cattle, poultry, and swine) and healthy humans sampled simultaneously from five Brazilian regions. Metagenomic analysis showed that a total of 21,029 unique species were identified in 107 rectal swabs collected from distinct hosts, the highest numbers of which belonged to the domain

Indexed as

Anti-Infective AgentsDrug Resistance, BacterialAnimalsAnti-Bacterial AgentsBacteriaBrazilCattleGenes, BacterialHumansMetagenomicsPoultrySwineAnti-Bacterial AgentsAnti-Infective Agentsantimicrobial resistance genesbacterial communitiesdrug resistancemetagenomicsOne Healthsurveillance

Identifiers

PMID35993730
PMCPMC9602611
OpenAlexW4292607763

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.