Evidence map›Paper›PMID 35993018›Full record

ArticleOxidative medicine and cellular longevity2022

The RPL4P4 Pseudogene Is a Prognostic Biomarker and Is Associated with Immune Infiltration in Glioma.

Zengliang Wang, Yirizhati Aili, Yongxin Wang, Nuersimanguli Maimaitiming, Hu Qin, Wenyu Ji, Guofeng Fan, Bo Li

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Oxidative medicine and cellular longevity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zengliang WangDepartment of Neurosurgery, Xinjiang Bazhou People's Hospital, Xinjiang, China.ORCID https://orcid.org/0000-0002-8411-5678
Yirizhati AiliDepartment of Neurosurgery, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0003-2194-8645
Yongxin WangDepartment of Neurosurgery, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0001-7590-2402
Nuersimanguli MaimaitimingDepartment of Oncology, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0003-2580-3080
Hu QinDepartment of Neurosurgery, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0001-8038-5008
Wenyu JiDepartment of Neurosurgery, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0002-0702-4617
Guofeng FanDepartment of Neurosurgery, First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang, China.ORCID https://orcid.org/0000-0001-9576-8917
Bo LiDepartment of Neurosurgery, Affiliated Hospital of Jining Medical University, Jining, Shandong, China.ORCID https://orcid.org/0000-0003-0783-4174
Xinjiang Medical University · CNAffiliated Hospital of Jining Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Research over the past decade has suggested important roles for pseudogenes in gliomas. Our previous study found that the RPL4P4 pseudogene is highly expressed in gliomas. However, its biological function in gliomas remains unclear. Methods: In this study, we analyzed clinical data on patients with glioma obtained from The Cancer Genome Atlas (TCGA), the Chinese Glioma Genome Atlas (CGGA), the Genotype-Tissue Expression (GTEx), and the GEPIA2 databases. We used the R language for the main analysis. Correlations among RPL4P4 expression, pathological characteristics, clinical outcome, and biological function were evaluated. In addition, the correlations of RPL4P4 expression with immune cell infiltration and glioma progression were analyzed. Finally, wound healing, Transwell, and CCK-8 assays were performed to analyze the function of RPL4P4 in glioma cells. Result: We found that RPL4P4 is highly expressed in glioma tissues and is associated with poor prognosis, IDH1 wild type, codeletion of 1p19q, and age. Multivariate analysis and the nomogram model showed that high RPL4P4 expression was an independent risk factor for glioma prognosis and had better prognostic prediction power. Moreover, high RPL4P4 expression correlated with immune cell infiltration, which showed a significant positive association with M2-type macrophages. Finally, RPL4P4 knockdown in glioma cell lines caused decreased glioma cell proliferation, invasion, and migration capacity. Conclusion: Our data suggest that RPL4P4 can function as an independent prognostic predictor of glioma. It also shows that RPL4P4 expression correlates with immune cell infiltration and that targeting RPL4P4 may be a new strategy for the treatment of glioma patients.

Indexed as

Brain NeoplasmsGliomaPseudogenesRibosomal ProteinsBiomarkersHumansPrognosisBiomarkersribosomal protein L4Ribosomal Proteins

Identifiers

PMID35993018
PMCPMC9381859
OpenAlexW4292432145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.