Evidence map›Paper›PMID 35992088›Full record

ArticleiScience2022

Transcriptomic heterogeneity of cultured ADSCs corresponds to embolic risk in the host.

Kaijing Yan, Jinlai Zhang, Wen Yin, Jeffrey N Harding, Fei Ma, Di Wu, Haibo Deng, Pengfei Han, Rui Li, Hongxu Peng and 2 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Kaijing YanRegenerative Medicine Research Center, Sichuan University West China Hospital, Chengdu, Sichuan 610044, China.
Jinlai ZhangStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Wen YinRegenerative Medicine Research Center, Sichuan University West China Hospital, Chengdu, Sichuan 610044, China.
Jeffrey N HardingRegenerative Medicine Research Center, Sichuan University West China Hospital, Chengdu, Sichuan 610044, China.
Fei MaStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Di WuStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Haibo DengStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Pengfei HanStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Rui LiStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Hongxu PengRegenerative Medicine Research Center, Sichuan University West China Hospital, Chengdu, Sichuan 610044, China.
Xin SongStem Cell Biology Laboratory, Tasly Pharmaceutical Co. Ltd, Tianjin 300410, China.
Y James KangRegenerative Medicine Research Center, Sichuan University West China Hospital, Chengdu, Sichuan 610044, China.
Tasly Holding Group (China) · CNSichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stem cell therapy emerges as an effective approach for treating various currently untreatable diseases. However, fatal and unknown risks caused by their systemic use remain to be a major obstacle to clinical application. We developed a functional single-cell RNA sequencing (scRNA-seq) procedure and identified that transcriptomic heterogeneity of adipose-derived stromal cells (ADSCs) in cultures is responsible for a fatal embolic risk of these cells in the host. The pro-embolic subpopulation of ADSCs in cultures was sorted by gene set enrichment analysis (GSEA) and verified by a supervised machine learning analysis. A mathematical model was developed and validated for the prediction of embolic risk of cultured ADSCs in animal models and further confirmed by its application to public data. Importantly, modification of culture conditions prevented the embolic risk. This novel procedure can be applied to other aspects of risk assessment and would help further the development of stem cell clinical applications.

Indexed as

computational bioinformaticsStem cells researchtranscriptomics

Identifiers

PMID35992088
PMCPMC9389247
OpenAlexW4289745712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.